RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 WRAP53Q9BUR4 548 aaKnown RBP18.36■□□□□ 0.53
SNAPC3-206ENST00000490969 SLC28A3Q9HAS3 691 aa18.36■□□□□ 0.53
SNAPC3-206ENST00000490969 SGK2Q9HBY8 427 aa18.36■□□□□ 0.53
SNAPC3-206ENST00000490969 CXXC1Q9P0U4 656 aaPredicted RBP18.36■□□□□ 0.53
SNAPC3-206ENST00000490969 GSTK1Q9Y2Q3 226 aa18.36■□□□□ 0.53
SNAPC3-206ENST00000490969 K7ERQ8 282 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 CASKO14936 926 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 KIAA0355O15063 1070 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 TLX2O43763 284 aaPredicted RBP18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 ARAFP10398 606 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 PTBP1P26599 531 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 TIA1P31483 386 aaKnown RBP eCLIP18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 AGFG1P52594 562 aaKnown RBP18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 AP1S2P56377 157 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 FABP5Q01469 135 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 ESX1Q8N693 406 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 IQCF1Q8N6M8 205 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 PLA2G15Q8NCC3 412 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 ZNF431Q8TF32 576 aaPredicted RBP18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 PHF21AQ96BD5 680 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 POLR2J3Q9H1A7 115 aaKnown RBP18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 PIGUQ9H490 435 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 BRF2Q9HAW0 419 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 COQ3Q9NZJ6 369 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 ATP6V1HQ9UI12 483 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 C5orf42Q9H799 3197 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 PRR23AA6NEV1 266 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 SNTNA6NMZ2 147 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 GFYI3L273 518 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 QSOX1O00391 747 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 PRKYO43930 277 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 NR2F6P10588 404 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 ZNF250P15622 560 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 CTRB1P17538 263 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 EN2P19622 333 aaPredicted RBP18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 GKP32189 559 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 CHI3L1P36222 383 aaPredicted RBP18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 SP140Q13342 867 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 RIN1Q13671 783 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 ZNF57Q68EA5 555 aaPredicted RBP18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 CTRB2Q6GPI1 263 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 TSPAN33Q86UF1 283 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 CBARPQ8N350 705 aaPredicted RBP18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 CIDECQ96AQ7 238 aaPredicted RBP18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 WACQ9BTA9 647 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 TESQ9UGI8 421 aaKnown RBP18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 PHF11Q9UIL8 331 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 MBD1Q9UIS9 605 aaPredicted RBP18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 ING4Q9UNL4 249 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 POLHQ9Y253 713 aa18.35■□□□□ 0.53
SNAPC3-206ENST00000490969 H0YIV9 168 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 CHP2O43745 196 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 SOD2P04179 222 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 OR56A5P0C7T3 313 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 MPC1LP0DKB6 136 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 NAGAP17050 411 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 ZNF8P17098 575 aaPredicted RBP18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 ELAVL4P26378 380 aaKnown RBP18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 SEMG2Q02383 582 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 TPBGQ13641 420 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 FCN2Q15485 313 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 SPIN4Q56A73 249 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 DCST1Q5T197 706 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 TRILQ7L0X0 811 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 THOC6Q86W42 341 aaKnown RBP18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 FAM26EQ8N5C1 309 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 CXorf40BQ96DE9 158 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 ZNF558Q96NG5 402 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 ATF6BQ99941 703 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 SPNS1Q9H2V7 528 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 REEP4Q9H6H4 257 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 FOLH1BQ9HBA9 442 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 MRPL39Q9NYK5 338 aaKnown RBP18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 ENPP1P22413 925 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 AVPR1BP47901 424 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 ALDH6A1Q02252 535 aaKnown RBP18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 BCL2L1Q07817 233 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 MPPE1Q53F39 396 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 SYT14P1Q58G82 188 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 BICRALQ6AI39 1079 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 GRHL2Q6ISB3 625 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 GATAD2BQ8WXI9 593 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 C12orf4Q9NQ89 552 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 GKN1Q9NS71 199 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 MGAT4AQ9UM21 535 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 ITM2BQ9Y287 266 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 NCKAP1Q9Y2A7 1128 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 KCNE2Q9Y6J6 123 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 KIAA1671Q9BY89 1806 aa18.34■□□□□ 0.53
SNAPC3-206ENST00000490969 SLC16A5O15375 505 aa18.33■□□□□ 0.53
SNAPC3-206ENST00000490969 PSIP1O75475 530 aaKnown RBP18.33■□□□□ 0.53
SNAPC3-206ENST00000490969 HMGA1P17096 107 aaKnown RBP18.33■□□□□ 0.53
SNAPC3-206ENST00000490969 FGF9P31371 208 aaPredicted RBP18.33■□□□□ 0.53
SNAPC3-206ENST00000490969 OPRD1P41143 372 aa18.33■□□□□ 0.53
SNAPC3-206ENST00000490969 IKZF1Q13422 519 aa18.33■□□□□ 0.53
SNAPC3-206ENST00000490969 MFSD13AQ14CX5 517 aa18.33■□□□□ 0.53
SNAPC3-206ENST00000490969 ATP13A5Q4VNC0 1218 aa18.33■□□□□ 0.53
SNAPC3-206ENST00000490969 C3orf38Q5JPI3 329 aa18.33■□□□□ 0.53
SNAPC3-206ENST00000490969 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.33■□□□□ 0.53
SNAPC3-206ENST00000490969 APOBEC4Q8WW27 367 aaKnown RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms