RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	CTF1	Q16619	201 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	TIGD6	Q17RP2	521 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	CTU2	Q2VPK5	515 aa	Known RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	SPANXN2	Q5MJ10	180 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	NDUFAF5	Q5TEU4	345 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	AGBL4	Q5VU57	503 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	TBC1D3C	Q6IPX1	549 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	ANKRD54	Q6NXT1	300 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	SLC48A1	Q6P1K1	146 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	ABHD17C	Q6PCB6	329 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	CEP68	Q76N32	757 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	CHST15	Q7LFX5	561 aa	Predicted RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	ADCK2	Q7Z695	626 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	UBE2Q1	Q7Z7E8	422 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	TMEM179B	Q7Z7N9	219 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	RBM23	Q86U06	439 aa	Known RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	FAM124A	Q86V42	546 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	AMIGO1	Q86WK6	493 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	OOSP2	Q86WS3	158 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	NRROS	Q86YC3	692 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	PEX5L	Q8IYB4	626 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	ENTHD1	Q8IYW4	607 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	TBC1D3	Q8IZP1	549 aa	Predicted RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	SDR16C5	Q8N3Y7	309 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	FAM26E	Q8N5C1	309 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	SLC5A8	Q8N695	610 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	OR2A1	Q8NGT9	310 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	OR14C36	Q8NHC7	312 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	NT5C	Q8TCD5	201 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	ZNF675	Q8TD23	568 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	GNPDA2	Q8TDQ7	276 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	UTP15	Q8TED0	518 aa	Known RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	LCN9	Q8WX39	176 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	AP3S1	Q92572	193 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	RERG	Q96A58	199 aa	Predicted RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	TAMM41	Q96BW9	452 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	MRPL48	Q96GC5	212 aa	Known RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	TMEM80	Q96HE8	168 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	SH3YL1	Q96HL8	342 aa	Predicted RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	PRRC1	Q96M27	445 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	ZNF578	Q96N58	590 aa	Predicted RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	AMDHD1	Q96NU7	426 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	PRAP1	Q96NZ9	151 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	OR2M4	Q96R27	311 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	SIGLEC11	Q96RL6	698 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	SERINC2	Q96SA4	455 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	TREX2	Q9BQ50	279 aa	Predicted RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	KRTAP4-12	Q9BQ66	201 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	POLDIP3	Q9BY77	421 aa	Known RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	ACTRT3	Q9BYD9	372 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	KRTAP9-9	Q9BYP9	154 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	KRTAP9-4	Q9BYQ2	154 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	ABCG4	Q9H172	646 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	CARS2	Q9HA77	564 aa	Known RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	NMNAT1	Q9HAN9	279 aa	Predicted RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	LYRM4	Q9HD34	91 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	ZCCHC3	Q9NUD5	404 aa	Known RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	C14orf105	Q9NVL8	296 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	CXXC1	Q9P0U4	656 aa	Predicted RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	NTM	Q9P121	344 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	MBD1	Q9UIS9	605 aa	Predicted RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	STUB1	Q9UNE7	303 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	EXO1	Q9UQ84	846 aa	Known RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	RNF6	Q9Y252	685 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	BTBD3	Q9Y2F9	522 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	GSTK1	Q9Y2Q3	226 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	TESMIN	Q9Y4I5	508 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	MAGED1	Q9Y5V3	778 aa	Predicted RBP	6	□□□□□ -1.45
FN1-223	ENST00000490833	DGKB	Q9Y6T7	804 aa		6	□□□□□ -1.45
FN1-223	ENST00000490833	MN1	Q10571	1320 aa	Predicted RBP	5.99	□□□□□ -1.45
FN1-223	ENST00000490833		A0A075B6Q4	140 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833		A0A087WV62	115 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	KIR2DS5	A0A0G2JLQ3	304 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833		A0A0G2JNG1	304 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833		A0A0J9YVX5	310 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	MYOCOS	A0A1B0GUC4	107 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	PDZK1P1	A8MUH7	402 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	KIR2DS3	K7RE56	304 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	TLR4	O00206	839 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	MEN1	O00255	615 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	HMGN4	O00479	90 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	AP3D1	O14617	1153 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	MID1	O15344	667 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	B3GALT2	O43825	422 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	FMO6P	O60774	539 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	NME6	O75414	186 aa	Predicted RBP	5.99	□□□□□ -1.45
FN1-223	ENST00000490833	NADK	O95544	446 aa	Predicted RBP	5.99	□□□□□ -1.45
FN1-223	ENST00000490833	ZBTB11	O95625	1053 aa	Predicted RBP	5.99	□□□□□ -1.45
FN1-223	ENST00000490833	FADS2	O95864	444 aa	Known RBP	5.99	□□□□□ -1.45
FN1-223	ENST00000490833	LGI1	O95970	557 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	PAK4	O96013	591 aa	Predicted RBP	5.99	□□□□□ -1.45
FN1-223	ENST00000490833	SCG5	P05408	212 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.99	□□□□□ -1.45	3e-19	■□□□□ 10.1
FN1-223	ENST00000490833	THBS1	P07996	1170 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	CELA2B	P08218	269 aa	Predicted RBP	5.99	□□□□□ -1.45
FN1-223	ENST00000490833	NR2F6	P10588	404 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	LAMP2	P13473	410 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	IL7R	P16871	459 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	CD247	P20963	164 aa		5.99	□□□□□ -1.45
FN1-223	ENST00000490833	CHM	P24386	653 aa		5.99	□□□□□ -1.45

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