RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 HSPB3Q12988 150 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 GAB1Q13480 694 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 DNASE1L3Q13609 305 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 NSDHLQ15738 373 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 PRICKLE4Q2TBC4 344 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 ZNF750Q32MQ0 723 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 TBC1D25Q3MII6 688 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 MFSD4BQ5TF39 518 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 FAM180BQ6P0A1 224 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 ZNF551Q7Z340 670 aaPredicted RBP12.5□□□□□ -0.41
TRAIP-210ENST00000489948 LAPTM4BQ86VI4 370 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 OR4N5Q8IXE1 308 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 GALNT12Q8IXK2 581 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 MSRB3Q8IXL7 192 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 CCDC116Q8IYX3 515 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 PGAM4Q8N0Y7 254 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 OR2L13Q8N349 312 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 OR8J3Q8NGG0 315 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 OR9A2Q8NGT5 310 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 OR14A16Q8NHC5 309 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 NKD1Q969G9 470 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 SLC7A6OSQ96CW6 309 aaPredicted RBP12.5□□□□□ -0.41
TRAIP-210ENST00000489948 LRRC58Q96CX6 371 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 CGREF1Q99674 301 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 HOPXQ9BPY8 73 aaPredicted RBP12.5□□□□□ -0.41
TRAIP-210ENST00000489948 INPP5KQ9BT40 448 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 SOX17Q9H6I2 414 aaPredicted RBP12.5□□□□□ -0.41
TRAIP-210ENST00000489948 CXorf36Q9H7Y0 433 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 CXorf21Q9HAI6 301 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 MAT2BQ9NZL9 334 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 KCND3Q9UK17 655 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 CROTQ9UKG9 612 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 TCFL5Q9UL49 500 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 ERVK-11Q9UQG0 969 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 MSRB2Q9Y3D2 182 aa12.5□□□□□ -0.41
TRAIP-210ENST00000489948 AIM2O14862 343 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 ANP32DO95626 131 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 TCN2P20062 427 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 UQCRC2P22695 453 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 PPIBP23284 216 aaKnown RBP12.49□□□□□ -0.41
TRAIP-210ENST00000489948 PTPN4P29074 926 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 SOX18P35713 384 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 EMP2P54851 167 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 RPS15P62841 145 aaKnown RBP12.49□□□□□ -0.41
TRAIP-210ENST00000489948 PRR5P85299 388 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 VAC14Q08AM6 782 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 MGAT2Q10469 447 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 MAP4K2Q12851 820 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 ART3Q13508 389 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 LTB4RQ15722 352 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 DNAL1Q4LDG9 190 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 FHL5Q5TD97 284 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 C6orf163Q5TEZ5 329 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 C16orf89Q6UX73 402 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 DNAJC14Q6Y2X3 702 aaPredicted RBP12.49□□□□□ -0.41
TRAIP-210ENST00000489948 ANKRD37Q7Z713 158 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 VWA5B2Q8N398 1253 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 RBM15BQ8NDT2 890 aaKnown RBP12.49□□□□□ -0.41
TRAIP-210ENST00000489948 OR56A1Q8NGH5 318 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 METTL21AQ8WXB1 218 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 ELP4Q96EB1 424 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 RBM18Q96H35 190 aaKnown RBP12.49□□□□□ -0.41
TRAIP-210ENST00000489948 FBXL20Q96IG2 436 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 ART5Q96L15 291 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 ANKRD27Q96NW4 1050 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 CPPED1Q9BRF8 314 aaPredicted RBP12.49□□□□□ -0.41
TRAIP-210ENST00000489948 SCNM1Q9BWG6 230 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 LRMDAQ9H2I8 198 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 SLC6A13Q9NSD5 602 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.49□□□□□ -0.41
TRAIP-210ENST00000489948 SLC25A37Q9NYZ2 338 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 VAPAQ9P0L0 249 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 SLAMF8Q9P0V8 285 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 ABCD2Q9UBJ2 740 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 ZNF639Q9UID6 485 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 PPIEQ9UNP9 301 aaKnown RBP12.49□□□□□ -0.41
TRAIP-210ENST00000489948 CORO2BQ9UQ03 480 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 FARSAQ9Y285 508 aaKnown RBP12.49□□□□□ -0.41
TRAIP-210ENST00000489948 PTRH2Q9Y3E5 179 aaKnown RBP12.49□□□□□ -0.41
TRAIP-210ENST00000489948 PCDHB14Q9Y5E9 798 aa12.49□□□□□ -0.41
TRAIP-210ENST00000489948 KMT2BQ9UMN6 2715 aaPredicted RBP12.49□□□□□ -0.41
TRAIP-210ENST00000489948 EPG5Q9HCE0 2579 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 RNF103-CHMP3A0A140T963 221 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 TRABD2BA6NFA1 517 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 OR2W5A6NFC9 320 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 SAGE2PA6NJ88 616 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 B2RBV5 119 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 DYRK3O43781 588 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 EFNA1P20827 205 aaPredicted RBP12.48□□□□□ -0.41
TRAIP-210ENST00000489948 NT5EP21589 574 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 MMP11P24347 488 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 GPC1P35052 558 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 DLSTP36957 453 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 MC3RP41968 323 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 NCALDP61601 193 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 TXNL4AP83876 142 aaKnown RBP12.48□□□□□ -0.41
TRAIP-210ENST00000489948 FUT7Q11130 342 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 SAXO2Q658L1 398 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 BHLHB9Q6PI77 547 aa12.48□□□□□ -0.41
TRAIP-210ENST00000489948 TMEM107Q6UX40 140 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms