RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 ZNF263O14978 683 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 OAS1P00973 400 aaKnown RBP3.74□□□□□ -1.81
CCDC39-206ENST00000489868 IGHV3-9P01782 118 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 P4HA1P13674 534 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 HSD17B1P14061 328 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 ZNF19P17023 458 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 PRRC2AP48634 2157 aaKnown RBP3.74□□□□□ -1.81
CCDC39-206ENST00000489868 IGLV3-21P80748 117 aaPredicted RBP3.74□□□□□ -1.81
CCDC39-206ENST00000489868 PAX2Q02962 417 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 C17orf67Q0P5P2 114 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 TGIF1Q15583 401 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 SGCBQ16585 318 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 ACER2Q5QJU3 275 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 SEL1L2Q5TEA6 688 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 FBXO25Q8TCJ0 367 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 RBM18Q96H35 190 aaKnown RBP3.74□□□□□ -1.81
CCDC39-206ENST00000489868 PIWIL1Q96J94 861 aaKnown RBP3.74□□□□□ -1.81
CCDC39-206ENST00000489868 YTHDF1Q9BYJ9 559 aaKnown RBP3.74□□□□□ -1.81
CCDC39-206ENST00000489868 DEFB126Q9BYW3 111 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 TSPYL1Q9H0U9 437 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 DCLRE1BQ9H816 532 aa3.74□□□□□ -1.81
CCDC39-206ENST00000489868 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.74□□□□□ -1.81
CCDC39-206ENST00000489868 IGHV3OR16-12A0A075B7B8 117 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 A0A1W2PNU3 283 aaPredicted RBP3.73□□□□□ -1.81
CCDC39-206ENST00000489868 YJEFN3A6XGL0 299 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 K7ERI5 159 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 REC8O95072 547 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 FCER2P06734 321 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 UCP1P25874 307 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 CALML3P27482 149 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 PPP2R1BP30154 601 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 CTNNB1P35222 781 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 MFAP2P55001 183 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 HERV-K104P63124 156 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 CXCL6P80162 114 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 KLF5Q13887 457 aaPredicted RBP3.73□□□□□ -1.81
CCDC39-206ENST00000489868 PPP1R3AQ16821 1122 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 MPPE1Q53F39 396 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 IFI44LQ53G44 452 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 ADAMTSL5Q6ZMM2 481 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 PRSS48Q7RTY5 328 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 GPR142Q7Z601 462 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 CRYGNQ8WXF5 182 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 BADQ92934 168 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 PTP4A1Q93096 173 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 BIRC7Q96CA5 298 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 FUNDC2Q9BWH2 189 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 ELL3Q9HB65 397 aaPredicted RBP3.73□□□□□ -1.81
CCDC39-206ENST00000489868 DNAJC11Q9NVH1 559 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 SEC14L4Q9UDX3 406 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 IKZF3Q9UKT9 509 aa3.73□□□□□ -1.81
CCDC39-206ENST00000489868 ZNF256Q9Y2P7 627 aaPredicted RBP3.73□□□□□ -1.81
CCDC39-206ENST00000489868 KLF18A0A0U1RQI7 1052 aa3.72□□□□□ -1.81
CCDC39-206ENST00000489868 CACNB4O00305 520 aaPredicted RBP3.72□□□□□ -1.81
CCDC39-206ENST00000489868 GMNNO75496 209 aa3.72□□□□□ -1.81
CCDC39-206ENST00000489868 LY6G6DO95868 133 aa3.72□□□□□ -1.81
CCDC39-206ENST00000489868 MDH2P40926 338 aaKnown RBP3.72□□□□□ -1.81
CCDC39-206ENST00000489868 RPS4XP62701 263 aaKnown RBP3.72□□□□□ -1.81
CCDC39-206ENST00000489868 CNPY1Q3B7I2 92 aa3.72□□□□□ -1.81
CCDC39-206ENST00000489868 MOB2Q70IA6 237 aa3.72□□□□□ -1.81
CCDC39-206ENST00000489868 OR4A16Q8NH70 328 aa3.72□□□□□ -1.81
CCDC39-206ENST00000489868 SPAG8Q99932 426 aaPredicted RBP3.72□□□□□ -1.81
CCDC39-206ENST00000489868 C2orf40Q9H1Z8 148 aa3.72□□□□□ -1.81
CCDC39-206ENST00000489868 GANQ9H2C0 597 aa3.72□□□□□ -1.81
CCDC39-206ENST00000489868 RNF41Q9H4P4 317 aaPredicted RBP3.72□□□□□ -1.81
CCDC39-206ENST00000489868 IL1RAPL2Q9NP60 686 aa3.72□□□□□ -1.81
CCDC39-206ENST00000489868 STX8Q9UNK0 236 aa3.72□□□□□ -1.81
CCDC39-206ENST00000489868 ATG4BQ9Y4P1 393 aa3.72□□□□□ -1.81
CCDC39-206ENST00000489868 FAM205AQ6ZU69 1335 aa3.71□□□□□ -1.81
CCDC39-206ENST00000489868 A0A0A6YYD4 124 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 FMO6PO60774 539 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 MBL2P11226 248 aaPredicted RBP3.71□□□□□ -1.82
CCDC39-206ENST00000489868 MEOX2P50222 304 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 ARHGDIAP52565 204 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 GEMP55040 296 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 UCP2P55851 309 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 EXOSC7Q15024 291 aaKnown RBP3.71□□□□□ -1.82
CCDC39-206ENST00000489868 ZNF674Q2M3X9 581 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 FUT11Q495W5 492 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 RTL6Q6ICC9 239 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 RAPH1Q70E73 1250 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 ANKRD23Q86SG2 305 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 LINC00518Q8N0U6 118 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 SFRP1Q8N474 314 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 ARL14Q8N4G2 192 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 SIGLEC12Q96PQ1 595 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 AKIRIN1Q9H9L7 192 aaPredicted RBP3.71□□□□□ -1.82
CCDC39-206ENST00000489868 FBXW2Q9UKT8 454 aa3.71□□□□□ -1.82
CCDC39-206ENST00000489868 IGHV3-35A0A0C4DH35 117 aa3.7□□□□□ -1.82
CCDC39-206ENST00000489868 LRRD1A4D1F6 860 aa3.7□□□□□ -1.82
CCDC39-206ENST00000489868 SH2D1BO14796 132 aa3.7□□□□□ -1.82
CCDC39-206ENST00000489868 GDF1P27539 372 aa3.7□□□□□ -1.82
CCDC39-206ENST00000489868 ATP5DP30049 168 aa3.7□□□□□ -1.82
CCDC39-206ENST00000489868 STIP1P31948 543 aaKnown RBP3.7□□□□□ -1.82
CCDC39-206ENST00000489868 LYZP61626 148 aa3.7□□□□□ -1.82
CCDC39-206ENST00000489868 KRT31Q15323 416 aa3.7□□□□□ -1.82
CCDC39-206ENST00000489868 CDC42EP5Q6NZY7 148 aa3.7□□□□□ -1.82
CCDC39-206ENST00000489868 GCNT7Q6ZNI0 430 aa3.7□□□□□ -1.82
CCDC39-206ENST00000489868 SERPINA12Q8IW75 414 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms