RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 POLR3GO15318 223 aaPredicted RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 NVLO15381 856 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 LDB2O43679 373 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 SPOPO43791 374 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 NDUFS7O75251 213 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 SYNGR4O95473 234 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 FGFR1OPO95684 399 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 CHRNA1P02708 482 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 C9P02748 559 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 EZRP15311 586 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 NCF2P19878 526 aaPredicted RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 CHATP28329 748 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 HNRNPH1P31943 449 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 BMI1P35226 326 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 AVPR1AP37288 418 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 CETN2P41208 172 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 MAGEA1P43355 309 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 ACADVLP49748 655 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 LIMK2P53671 638 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 GAS1P54826 345 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 TAS2R38P59533 333 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 HAND2P61296 217 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 PPIAP62937 165 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 SPAG1Q07617 926 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 HERC3Q15034 1050 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 UGT3A2Q3SY77 523 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 AGBL2Q5U5Z8 902 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 SYT10Q6XYQ8 523 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF841Q6ZN19 808 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 TRMT1LQ7Z2T5 733 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 CLIP4Q8N3C7 705 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 GCSAMQ8N6F7 178 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 KLHDC1Q8N7A1 406 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 MNS1Q8NEH6 495 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 OR10Q1Q8NGQ4 319 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 OR4L1Q8NH43 312 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 GOLGA5Q8TBA6 731 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 CHPT1Q8WUD6 406 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 PHYHIPQ92561 330 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 TAAR8Q969N4 342 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 NCLNQ969V3 563 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 TMEM45BQ96B21 275 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 LGALS12Q96DT0 336 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 RBM41Q96IZ5 413 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 FAM20AQ96MK3 541 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 CBWD1Q9BRT8 395 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 ALKBH7Q9BT30 221 aaPredicted RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 MRPL37Q9BZE1 423 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 STMN4Q9H169 189 aaPredicted RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 KLHL31Q9H511 634 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 APMAPQ9HDC9 416 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 CNGB3Q9NQW8 809 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 UBAP1Q9NZ09 502 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 PDP1Q9P0J1 537 aaPredicted RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 P2RX2Q9UBL9 471 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 TEKT2Q9UIF3 430 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 DAPK2Q9UIK4 370 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 CHMP2BQ9UQN3 213 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 SPIN1Q9Y657 262 aaPredicted RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 COMMD3-BMI1R4GMX3 469 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 RGPD2P0DJD1 1756 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 COL14A1Q05707 1796 aaKnown RBP2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 DISP2A7MBM2 1401 aa2.89□□□□□ -1.95
DEPDC1-204ENST00000489862 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 NWD2Q9ULI1 1742 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 TRAV24A0A0B4J272 114 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 E5RGE8 158 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 NPIPA2E9PIF3 369 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 WRBO00258 174 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 ARPC3O15145 178 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 ALOX15BO15296 676 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 MLNRO43193 412 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 SPINT2O43291 252 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 OR1F1O43749 312 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 NME2P1O60361 137 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 ZIC3O60481 467 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 FCMRO60667 390 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 NDUFB4O95168 129 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 PIGNO95427 931 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 STAMBPO95630 424 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 POP4O95707 220 aaKnown RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 CPNE6O95741 557 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 ERVK-10P10266 1014 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 FCGR1AP12314 374 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 CCDC130P13994 396 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 ZNF12P17014 697 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 CYP3A5P20815 502 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 CBLP22681 906 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 CSTF2P33240 577 aaKnown RBP eCLIP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 CYLC1P35663 651 aaPredicted RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 TRIM23P36406 574 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 ANP32AP39687 249 aaKnown RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 MAGEA11P43364 429 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 RPL21P46778 160 aaKnown RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 SLC9A3P48764 834 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 MMP15P51511 669 aa2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 NR0B1P51843 470 aaKnown RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 HNRNPH2P55795 449 aaKnown RBP2.88□□□□□ -1.95
DEPDC1-204ENST00000489862 SEC61GP60059 68 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms