RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 OR7G1Q8NGA0 311 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.09■□□□□ 0.17
MDC1-206ENST00000489540 DOK4Q8TEW6 326 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 ASB15Q8WXK1 588 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 ZNF681Q96N22 645 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 TAAR6Q96RI8 345 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 RASL10BQ96S79 203 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 KLHL1Q9NR64 748 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 GIMAP4Q9NUV9 329 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 OLAHQ9NV23 265 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 ARGLU1Q9NWB6 273 aaPredicted RBP16.09■□□□□ 0.17
MDC1-206ENST00000489540 HPF1Q9NWY4 346 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 ZDHHC2Q9UIJ5 367 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 TMED5Q9Y3A6 229 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 POLR3HQ9Y535 204 aaPredicted RBP16.09■□□□□ 0.17
MDC1-206ENST00000489540 PTGDR2Q9Y5Y4 395 aa16.09■□□□□ 0.17
MDC1-206ENST00000489540 HELZ2Q9BYK8 2649 aaKnown RBP16.08■□□□□ 0.17
MDC1-206ENST00000489540 CBX6O95503 412 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 HSPA4LO95757 839 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 ABCE1P61221 599 aaKnown RBP16.08■□□□□ 0.16
MDC1-206ENST00000489540 MAGOHP61326 146 aaKnown RBP16.08■□□□□ 0.16
MDC1-206ENST00000489540 HHATQ5VTY9 493 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 FAM71E1Q6IPT2 247 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 OPN5Q6U736 354 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 C16orf47Q6ZP98 133 aaPredicted RBP16.08■□□□□ 0.16
MDC1-206ENST00000489540 IKBIPQ70UQ0 350 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 ZNF227Q86WZ6 799 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 CYP4Z2PQ8N1L4 340 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 SLC15A4Q8N697 577 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 FAM98AQ8NCA5 519 aaKnown RBP16.08■□□□□ 0.16
MDC1-206ENST00000489540 OR2T11Q8NH01 316 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 AGR3Q8TD06 166 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 TLCD1Q96CP7 247 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 CNRIP1Q96F85 164 aaPredicted RBP16.08■□□□□ 0.16
MDC1-206ENST00000489540 PAIP2Q9BPZ3 127 aaKnown RBP16.08■□□□□ 0.16
MDC1-206ENST00000489540 MYNNQ9NPC7 610 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 SLC35C2Q9NQQ7 365 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 ERVK-11Q9UQG0 969 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 ENTPD4Q9Y227 616 aa16.08■□□□□ 0.16
MDC1-206ENST00000489540 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.08■□□□□ 0.16
MDC1-206ENST00000489540 NBASA2RRP1 2371 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 TMEM120BA0PK00 339 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 TMEM233B4DJY2 109 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 PIP5K1BO14986 540 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 LSM1O15116 133 aaKnown RBP16.07■□□□□ 0.16
MDC1-206ENST00000489540 NME2P1O60361 137 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 CT62P0C5K7 136 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 EDN3P14138 238 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 NME2P22392 152 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 GNLYP22749 145 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 SSTR4P31391 388 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 PRICKLE4Q2TBC4 344 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 ZNF324BQ6AW86 544 aaPredicted RBP16.07■□□□□ 0.16
MDC1-206ENST00000489540 GALNTL5Q7Z4T8 443 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 CCDC116Q8IYX3 515 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 KIRREL3Q8IZU9 778 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 VWA5B2Q8N398 1253 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 ANKRD42Q8N9B4 389 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 SLC22A8Q8TCC7 542 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 TP53INP1Q96A56 240 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 EXOSC8Q96B26 276 aaKnown RBP16.07■□□□□ 0.16
MDC1-206ENST00000489540 SGCZQ96LD1 299 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 PPP3R2Q96LZ3 170 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 HES7Q9BYE0 225 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 BRINP2Q9C0B6 783 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 OR10A5Q9H207 317 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 TIMMDC1Q9NPL8 285 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 MIEF1Q9NQG6 463 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 TAS2R7Q9NYW3 318 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 CFL2Q9Y281 166 aa16.07■□□□□ 0.16
MDC1-206ENST00000489540 KLF13Q9Y2Y9 288 aaPredicted RBP16.07■□□□□ 0.16
MDC1-206ENST00000489540 C2orf92A0A1B0GVN3 265 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 ASPDHA6ND91 283 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 ITM2AO43736 263 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 OR6B1O95007 311 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 CLPSP04118 112 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 S1PR1P21453 382 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 MPIP34949 423 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 SOX3P41225 446 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 MGAT2Q10469 447 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 STX3Q13277 289 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 ELOAQ14241 798 aaKnown RBP16.06■□□□□ 0.16
MDC1-206ENST00000489540 EBPQ15125 230 aaKnown RBP16.06■□□□□ 0.16
MDC1-206ENST00000489540 CEBPEQ15744 281 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 RFTN2Q52LD8 501 aaPredicted RBP16.06■□□□□ 0.16
MDC1-206ENST00000489540 HLA-DQA1Q5Y7H0 255 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 IL20RBQ6UXL0 311 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 ZNF615Q8N8J6 731 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 ST6GALNAC3Q8NDV1 305 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 CDC26Q8NHZ8 85 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 NR4A3Q92570 626 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 CTHRC1Q96CG8 243 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 ERP27Q96DN0 273 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 FCRL1Q96LA6 429 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 SLX1AQ9BQ83 275 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 WWTR1Q9GZV5 400 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 NKIRAS1Q9NYS0 192 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 MAT2BQ9NZL9 334 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 RAP2CQ9Y3L5 183 aa16.06■□□□□ 0.16
MDC1-206ENST00000489540 ANKUB1A6NFN9 424 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms