RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ZNF37AP17032 561 aaPredicted RBP14.72□□□□□ -0.05
USP48-210ENST00000489108 CD22P20273 847 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 HIST1H1TP22492 207 aaPredicted RBP14.72□□□□□ -0.05
USP48-210ENST00000489108 CRYGSP22914 178 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 PTPN6P29350 595 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 PLIN5Q00G26 463 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 BIKQ13323 160 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 CAPRIN1Q14444 709 aaKnown RBP14.72□□□□□ -0.05
USP48-210ENST00000489108 TSNQ15631 228 aaKnown RBP14.72□□□□□ -0.05
USP48-210ENST00000489108 AP5B1Q2VPB7 878 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 FBXO48Q5FWF7 155 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 TIGD3Q6B0B8 471 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 PODNL1Q6PEZ8 512 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 ADGRE4PQ86SQ3 457 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 ANKRD7Q92527 254 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 WNT2BQ93097 391 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 ESAMQ96AP7 390 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 HS3ST6Q96QI5 342 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 SORBS1Q9BX66 1292 aaKnown RBP14.72□□□□□ -0.05
USP48-210ENST00000489108 MS4A8Q9BY19 250 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 EHD1Q9H4M9 534 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 PPANQ9NQ55 473 aaKnown RBP14.72□□□□□ -0.05
USP48-210ENST00000489108 ZNF226Q9NYT6 803 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 GPRC5BQ9NZH0 403 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 FETUBQ9UGM5 382 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 PACSIN3Q9UKS6 424 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 CUBNO60494 3623 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 ROS1P08922 2347 aa14.72□□□□□ -0.05
USP48-210ENST00000489108 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 C2orf92A0A1B0GVN3 265 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 H0Y3Z8 333 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 SAP18O00422 153 aaKnown RBP14.71□□□□□ -0.05
USP48-210ENST00000489108 TAPBPO15533 448 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 PRKRAO75569 313 aaKnown RBP14.71□□□□□ -0.05
USP48-210ENST00000489108 TNFSF13O75888 250 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 TGFB1P01137 390 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 CXCR5P32302 372 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 NR1H2P55055 460 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 PCDH1Q08174 1060 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 SLAMF1Q13291 335 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 TNK1Q13470 666 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 GAB1Q13480 694 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 ZNF460Q14592 562 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 SPANXN3Q5MJ09 141 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 C18orf63Q68DL7 685 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 FRA10AC1Q70Z53 315 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 ST13P4Q8IZP2 240 aaPredicted RBP14.71□□□□□ -0.05
USP48-210ENST00000489108 NKAPQ8N5F7 415 aaKnown RBP14.71□□□□□ -0.05
USP48-210ENST00000489108 MAPK1IP1LQ8NDC0 245 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 TANKQ92844 425 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 RIT1Q92963 219 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 PTCD3Q96EY7 689 aaKnown RBP14.71□□□□□ -0.05
USP48-210ENST00000489108 CERS2Q96G23 380 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 TMEM41AQ96HV5 264 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 UCN2Q96RP3 112 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 KRT12Q99456 494 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 MED18Q9BUE0 208 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 DNAJC11Q9NVH1 559 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 CTNNAL1Q9UBT7 734 aa14.71□□□□□ -0.05
USP48-210ENST00000489108 CORO1CQ9ULV4 474 aaPredicted RBP14.71□□□□□ -0.05
USP48-210ENST00000489108 OR6C76A6NM76 312 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 MSTNO14793 375 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 SCELO95171 688 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 TTC4O95801 387 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 LOXP28300 417 aaPredicted RBP14.7□□□□□ -0.06
USP48-210ENST00000489108 SSR2P43308 183 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 EEF1A1P68104 462 aaKnown RBP14.7□□□□□ -0.06
USP48-210ENST00000489108 SPRED3Q2MJR0 410 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 EEF1A1P5Q5VTE0 462 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 HEPHL1Q6MZM0 1159 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 ANGPTL8Q6UXH0 198 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 PLEKHM3Q6ZWE6 761 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 IGDCC3Q8IVU1 814 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 TRIM42Q8IWZ5 723 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 SNX31Q8N9S9 440 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 OR1J4Q8NGS1 313 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 ZNF473Q8WTR7 871 aaKnown RBP14.7□□□□□ -0.06
USP48-210ENST00000489108 ANKRD49Q8WVL7 239 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 IGFBPL1Q8WX77 278 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 TMEM158Q8WZ71 300 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 TP53INP1Q96A56 240 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 MAGOHBQ96A72 148 aaKnown RBP14.7□□□□□ -0.06
USP48-210ENST00000489108 WDR34Q96EX3 536 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 VPS39Q96JC1 886 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 MARK4Q96L34 752 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 FAM111AQ96PZ2 611 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 TMEM79Q9BSE2 394 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 G6PC3Q9BUM1 346 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 PHACTR1Q9C0D0 580 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 ACBD3Q9H3P7 528 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 PRM3Q9NNZ6 103 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 SNX15Q9NRS6 342 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 WWOXQ9NZC7 414 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 CLCF1Q9UBD9 225 aa14.7□□□□□ -0.06
USP48-210ENST00000489108 EXPH5Q8NEV8 1989 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 A0A1W2PNV4 684 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 C2orf72A6NCS6 295 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 OR10H2O60403 315 aa14.69□□□□□ -0.06
USP48-210ENST00000489108 SMNDC1O75940 238 aaKnown RBP eCLIP14.69□□□□□ -0.06
USP48-210ENST00000489108 IFNA2P01563 188 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms