RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 LRRC63Q05C16 580 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 SLC3A1Q07837 685 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 SERTAD2Q14140 314 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 MEF2DQ14814 521 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 HERPUD1Q15011 391 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 MS4A13Q5J8X5 152 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 C1orf141Q5JVX7 400 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 AGBL2Q5U5Z8 902 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 APOOLQ6UXV4 268 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 Q6ZRG5 221 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 KRT74Q7RTS7 529 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 SPATA19Q7Z5L4 167 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 DZIP1Q86YF9 867 aaKnown RBP2.43□□□□□ -2.02
SMC4-219ENST00000487747 CCDC26Q8TAB7 109 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 SSX3Q99909 188 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 ZNF559Q9BR84 538 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 SLC25A19Q9HC21 320 aa2.43□□□□□ -2.02
SMC4-219ENST00000487747 ACEP12821 1306 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 KAT6BQ8WYB5 2073 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 KBTBD13C9JR72 458 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 MAGEB4O15481 346 aaPredicted RBP2.42□□□□□ -2.02
SMC4-219ENST00000487747 DFNA5O60443 496 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 SLC2A10O95528 541 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 SNRPCP09234 159 aaKnown RBP2.42□□□□□ -2.02
SMC4-219ENST00000487747 PVRP15151 417 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 UCP1P25874 307 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 CAPZA1P52907 286 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 SBK1Q52WX2 424 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 PODNL1Q6PEZ8 512 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 C17orf64Q86WR6 236 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 CKAP2Q8WWK9 683 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 BIRC7Q96CA5 298 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 FERMT1Q9BQL6 677 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 IDI2Q9BXS1 227 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 OR10A4Q9H209 315 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 PATZ1Q9HBE1 687 aaKnown RBP2.42□□□□□ -2.02
SMC4-219ENST00000487747 ZNF331Q9NQX6 463 aaPredicted RBP2.42□□□□□ -2.02
SMC4-219ENST00000487747 TECRQ9NZ01 308 aaKnown RBP2.42□□□□□ -2.02
SMC4-219ENST00000487747 CCPG1Q9ULG6 757 aa2.42□□□□□ -2.02
SMC4-219ENST00000487747 FGD5Q6ZNL6 1462 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 MAGEB16A2A368 324 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 CA11O75493 328 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 STBD1O95210 358 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 MMP10P09238 476 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 ALPIP09923 528 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 PTPN4P29074 926 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 IER3P46695 156 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 OR3A4PP47883 348 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 NT5C2P49902 561 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 PPOXP50336 477 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 ZNF41P51814 821 aaPredicted RBP2.41□□□□□ -2.02
SMC4-219ENST00000487747 OR1C1Q15619 314 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 CCDC14Q49A88 953 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 ADAMTSL5Q6ZMM2 481 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 MOB2Q70IA6 237 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 ZNF444Q8N0Y2 327 aaPredicted RBP2.41□□□□□ -2.02
SMC4-219ENST00000487747 ZNF561Q8N587 486 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 TPRX1Q8N7U7 411 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 UXS1Q8NBZ7 420 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 FBXO25Q8TCJ0 367 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 SLC25A38Q96DW6 304 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 CAPNS2Q96L46 248 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 AGPAT1Q99943 283 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 JPH2Q9BR39 696 aaPredicted RBP2.41□□□□□ -2.02
SMC4-219ENST00000487747 LRRC2Q9BYS8 371 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 GDF3Q9NR23 364 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 DNAJC11Q9NVH1 559 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 RAB26Q9ULW5 256 aa2.41□□□□□ -2.02
SMC4-219ENST00000487747 G3V3Y1 287 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 EEF2KO00418 725 aaKnown RBP2.4□□□□□ -2.03
SMC4-219ENST00000487747 CHUKO15111 745 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 RTN2O75298 545 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 OAS1P00973 400 aaKnown RBP2.4□□□□□ -2.03
SMC4-219ENST00000487747 RLN1P04808 185 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 WNT2P09544 360 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 UGT1A6P19224 532 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 TRIM23P36406 574 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 KCNJ1P48048 391 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 TKTL1P51854 596 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 AKAP17AQ02040 695 aaKnown RBP2.4□□□□□ -2.03
SMC4-219ENST00000487747 TLE4Q04727 773 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 MSLNQ13421 630 aaPredicted RBP2.4□□□□□ -2.03
SMC4-219ENST00000487747 PAGE2BQ5JRK9 111 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 RHBDD2Q6NTF9 364 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 TRAT1Q6PIZ9 186 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 TRPV3Q8NET8 790 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 GOLGA5Q8TBA6 731 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 STARD4Q96DR4 205 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 C19orf24Q9BVV8 132 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 NUSAP1Q9BXS6 441 aaKnown RBP2.4□□□□□ -2.03
SMC4-219ENST00000487747 SLC25A39Q9BZJ4 359 aaPredicted RBP2.4□□□□□ -2.03
SMC4-219ENST00000487747 NTN4Q9HB63 628 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 HPS4Q9NQG7 708 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 SLCO1C1Q9NYB5 712 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 RNF115Q9Y4L5 304 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 RLFQ13129 1914 aa2.4□□□□□ -2.03
SMC4-219ENST00000487747 A0A087X0K7 114 aa2.39□□□□□ -2.03
SMC4-219ENST00000487747 TRIM49D1C9J1S8 452 aa2.39□□□□□ -2.03
SMC4-219ENST00000487747 NME6O75414 186 aaPredicted RBP2.39□□□□□ -2.03
SMC4-219ENST00000487747 NUDT14O95848 222 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms