RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 GUCY1B2O75343 617 aa24.69■■□□□ 1.54
HLA-C-208ENST00000487245 PTTG1O95997 202 aa24.69■■□□□ 1.54
HLA-C-208ENST00000487245 H1F0P07305 194 aaKnown RBP24.69■■□□□ 1.54
HLA-C-208ENST00000487245 NLGN4XQ8N0W4 816 aa24.69■■□□□ 1.54
HLA-C-208ENST00000487245 KXD1Q9BQD3 176 aa24.69■■□□□ 1.54
HLA-C-208ENST00000487245 RSPO3Q9BXY4 272 aaPredicted RBP24.69■■□□□ 1.54
HLA-C-208ENST00000487245 MRPS30Q9NP92 439 aaKnown RBP24.69■■□□□ 1.54
HLA-C-208ENST00000487245 ABCB10Q9NRK6 738 aa24.69■■□□□ 1.54
HLA-C-208ENST00000487245 KCNK6Q9Y257 313 aa24.69■■□□□ 1.54
HLA-C-208ENST00000487245 PRR19A6NJB7 356 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 B4GALT2O60909 372 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 ENDOUP21128 410 aaKnown RBP24.68■■□□□ 1.54
HLA-C-208ENST00000487245 SOX6P35712 828 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 EIF2B2P49770 351 aaKnown RBP24.68■■□□□ 1.54
HLA-C-208ENST00000487245 CRISP3P54108 245 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 RPS26P62854 115 aaKnown RBP24.68■■□□□ 1.54
HLA-C-208ENST00000487245 ALDH6A1Q02252 535 aaKnown RBP24.68■■□□□ 1.54
HLA-C-208ENST00000487245 FAM180BQ6P0A1 224 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 TMEM184AQ6ZMB5 413 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 PARP16Q8N5Y8 322 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 KLK6Q92876 244 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 TRNT1Q96Q11 434 aaKnown RBP24.68■■□□□ 1.54
HLA-C-208ENST00000487245 DPH7Q9BTV6 452 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 TEX10Q9NXF1 929 aaPredicted RBP24.68■■□□□ 1.54
HLA-C-208ENST00000487245 FBXL12Q9NXK8 326 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 YBX2Q9Y2T7 364 aaKnown RBP24.68■■□□□ 1.54
HLA-C-208ENST00000487245 LSM2Q9Y333 95 aaKnown RBP24.68■■□□□ 1.54
HLA-C-208ENST00000487245 A0A075B6Q4 140 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 PNMA8CA0A1B0GUJ8 204 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 PLRG1O43660 514 aaKnown RBP24.68■■□□□ 1.54
HLA-C-208ENST00000487245 MED26O95402 600 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 SERPIND1P05546 499 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 CSTF2P33240 577 aaKnown RBP eCLIP24.68■■□□□ 1.54
HLA-C-208ENST00000487245 KRR1Q13601 381 aaKnown RBP24.68■■□□□ 1.54
HLA-C-208ENST00000487245 NCF4Q15080 339 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 SEC23BQ15437 767 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 TSTQ16762 297 aaKnown RBP24.68■■□□□ 1.54
HLA-C-208ENST00000487245 STEAP3Q658P3 488 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 GDPGP1Q6ZNW5 385 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 FAM131CQ96AQ9 280 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 MYADMQ96S97 322 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 XKR8Q9H6D3 395 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 FBRSQ9HAH7 460 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 SIAEQ9HAT2 523 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 TAS2R16Q9NYV7 291 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 ZNF229Q9UJW7 825 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 HEBP2Q9Y5Z4 205 aa24.68■■□□□ 1.54
HLA-C-208ENST00000487245 IGKV1-8A0A0C4DH67 115 aa24.67■■□□□ 1.54
HLA-C-208ENST00000487245 A0A1W2PQU0 124 aa24.67■■□□□ 1.54
HLA-C-208ENST00000487245 ARHGAP33O14559 1287 aa24.67■■□□□ 1.54
HLA-C-208ENST00000487245 HAT1O14929 419 aa24.67■■□□□ 1.54
HLA-C-208ENST00000487245 KIAA0513O60268 411 aa24.67■■□□□ 1.54
HLA-C-208ENST00000487245 SEMA7AO75326 666 aa24.67■■□□□ 1.54
HLA-C-208ENST00000487245 ENTPD6O75354 484 aa24.67■■□□□ 1.54
HLA-C-208ENST00000487245 SCG5P05408 212 aa24.67■■□□□ 1.54
HLA-C-208ENST00000487245 AHRP35869 848 aa24.67■■□□□ 1.54
HLA-C-208ENST00000487245 ANXA11P50995 505 aaKnown RBP24.67■■□□□ 1.54
HLA-C-208ENST00000487245 UAP1L1Q3KQV9 507 aa24.67■■□□□ 1.54
HLA-C-208ENST00000487245 WDR36Q8NI36 951 aaKnown RBP24.67■■□□□ 1.54
HLA-C-208ENST00000487245 TRMT61BQ9BVS5 477 aaKnown RBP24.67■■□□□ 1.54
HLA-C-208ENST00000487245 RNF167Q9H6Y7 350 aa24.67■■□□□ 1.54
HLA-C-208ENST00000487245 PRDM8Q9NQV8 689 aa24.67■■□□□ 1.54
HLA-C-208ENST00000487245 POLE4Q9NR33 117 aa24.67■■□□□ 1.54
HLA-C-208ENST00000487245 P2RX2Q9UBL9 471 aa24.67■■□□□ 1.54
HLA-C-208ENST00000487245 TBX1O43435 398 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 RNGTTO60942 597 aaKnown RBP24.66■■□□□ 1.54
HLA-C-208ENST00000487245 HSMCR30P0CW71 290 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 NTSP30990 170 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 TIE1P35590 1138 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 KIR2DL1P43626 348 aaPredicted RBP24.66■■□□□ 1.54
HLA-C-208ENST00000487245 CD300CQ08708 224 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 SLC9A5Q14940 896 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 MED22Q15528 200 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 SSX1Q16384 188 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 OCLNQ16625 522 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 SOWAHCQ53LP3 525 aaPredicted RBP24.66■■□□□ 1.54
HLA-C-208ENST00000487245 C9orf50Q5SZB4 431 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 CYP4Z2PQ8N1L4 340 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 OR14C36Q8NHC7 312 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 KLHL6Q8WZ60 621 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 SLC35G5Q96KT7 338 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 OPALINQ96PE5 141 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 APOOQ9BUR5 198 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 SLC35C2Q9NQQ7 365 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 GPSM3Q9Y4H4 160 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 GPC6Q9Y625 555 aaPredicted RBP24.66■■□□□ 1.54
HLA-C-208ENST00000487245 CCDC88CQ9P219 2028 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 PRICKLE3O43900 615 aaPredicted RBP24.66■■□□□ 1.54
HLA-C-208ENST00000487245 NDUFAF5Q5TEU4 345 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 SDE2Q6IQ49 451 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 PGBD2Q6P3X8 592 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 CD300LDQ6UXZ3 194 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 CCDC190Q86UF4 302 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 OR52E1Q8NGJ3 308 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 C17orf62Q9BQA9 187 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 SARGQ9BW04 601 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 C5AR2Q9P296 337 aa24.66■■□□□ 1.54
HLA-C-208ENST00000487245 PDZK1P1A8MUH7 402 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 ANHXE9PGG2 379 aa24.65■■□□□ 1.54
HLA-C-208ENST00000487245 FAM227AF5H4B4 570 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms