RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 PHF10Q8WUB8 498 aaKnown RBP19.2■□□□□ 0.66
HPS3-206ENST00000486530 XAGE5Q8WWM1 108 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 PATE1Q8WXA2 126 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 ZNF354BQ96LW1 612 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 SERINC2Q96SA4 455 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 SEC14L3Q9UDX4 400 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 PILRAQ9UKJ1 303 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 TPRKBQ9Y3C4 175 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 GPC6Q9Y625 555 aaPredicted RBP19.2■□□□□ 0.66
HPS3-206ENST00000486530 SCN3AQ9NY46 2000 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 A0A0J9YVX5 310 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 SMIM10L1P0DMW3 83 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 ZNF10P21506 573 aaPredicted RBP19.2■□□□□ 0.66
HPS3-206ENST00000486530 FEN1P39748 380 aaKnown RBP19.2■□□□□ 0.66
HPS3-206ENST00000486530 KCNJ5P48544 419 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 CRISP3P54108 245 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 TNFRSF17Q02223 184 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 DUSP2Q05923 314 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 DYNC1I2Q13409 638 aaKnown RBP19.2■□□□□ 0.66
HPS3-206ENST00000486530 ZNF750Q32MQ0 723 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 PUS10Q3MIT2 529 aaKnown RBP19.2■□□□□ 0.66
HPS3-206ENST00000486530 TMEM107Q6UX40 140 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 FAM174AQ8TBP5 190 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 SGCDQ92629 289 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 SMIM10Q96HG1 83 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 ZNF681Q96N22 645 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 COL21A1Q96P44 957 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 NODALQ96S42 347 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 DOK1Q99704 481 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 ZFYVE21Q9BQ24 234 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 CDC14AQ9UNH5 594 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 NINQ8N4C6 2090 aa19.2■□□□□ 0.66
HPS3-206ENST00000486530 A0A1W2PPC4 97 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 PRAMEF27A3QJZ7 478 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 P2RX6O15547 441 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 EMC8O43402 210 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 SEC14L2O76054 403 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 CCNB2O95067 398 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 C8orf89P0DMQ9 161 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 PRKAG1P54619 331 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 STARD6P59095 220 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 GANABQ14697 944 aaKnown RBP19.19■□□□□ 0.66
HPS3-206ENST00000486530 PROX2Q3B8N5 592 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 ABHD13Q7L211 337 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 TAF8Q7Z7C8 310 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 TSTD1Q8NFU3 115 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 SLC37A2Q8TED4 501 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 ZNF556Q9HAH1 456 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 C3orf14Q9HBI5 128 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 BCL2L10Q9HD36 194 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 SCN3BQ9NY72 215 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 TMEM9Q9P0T7 183 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 ENOPH1Q9UHY7 261 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 HCN4Q9Y3Q4 1203 aa19.19■□□□□ 0.66
HPS3-206ENST00000486530 HMGN2P05204 90 aaKnown RBP19.18■□□□□ 0.66
HPS3-206ENST00000486530 ALPPL2P10696 532 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 CTSEP14091 401 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 BLKP51451 505 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 LASP1Q14847 261 aaKnown RBP19.18■□□□□ 0.66
HPS3-206ENST00000486530 COLEC12Q5KU26 742 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 GPR107Q5VW38 600 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 SAMD14Q8IZD0 417 aaPredicted RBP19.18■□□□□ 0.66
HPS3-206ENST00000486530 FRMD1Q8N878 549 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 ZCCHC10Q8TBK6 192 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 RSC1A1Q92681 617 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 RERGQ96A58 199 aaPredicted RBP19.18■□□□□ 0.66
HPS3-206ENST00000486530 C12orf43Q96C57 262 aaKnown RBP19.18■□□□□ 0.66
HPS3-206ENST00000486530 SPATA5L1Q9BVQ7 753 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 PRDM9Q9NQV7 894 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 PRDM6Q9NQX0 595 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 RLIMQ9NVW2 624 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 PAK1IP1Q9NWT1 392 aaPredicted RBP19.18■□□□□ 0.66
HPS3-206ENST00000486530 WNT16Q9UBV4 365 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 MRPS17Q9Y2R5 130 aaKnown RBP19.18■□□□□ 0.66
HPS3-206ENST00000486530 A0A0J9YY10 115 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 FAM170BA6NMN3 283 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 PTGES3LE9PB15 166 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 B3GALT2O43825 422 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 XPNPEP2O43895 674 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 NDUFS2O75306 463 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 ZNF217O75362 1048 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 CELA2BP08218 269 aaPredicted RBP19.18■□□□□ 0.66
HPS3-206ENST00000486530 CPN2P22792 545 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 FMO3P31513 532 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 LIM2P55344 173 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 UBXN2BQ14CS0 331 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 ZNF542PQ5EBM4 170 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 PRAMEF8Q5VWM4 474 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 PRAMEF7Q5VXH5 474 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 PARGQ86W56 976 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 CCDC71Q8IV32 467 aaPredicted RBP19.18■□□□□ 0.66
HPS3-206ENST00000486530 RBM12BQ8IXT5 1001 aaKnown RBP19.18■□□□□ 0.66
HPS3-206ENST00000486530 TAGAPQ8N103 731 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 OR9Q2Q8NGE9 314 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 OR9A2Q8NGT5 310 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 BAHD1Q8TBE0 780 aaPredicted RBP19.18■□□□□ 0.66
HPS3-206ENST00000486530 KLHL6Q8WZ60 621 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 KLHDC7BQ96G42 594 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 C10orf90Q96M02 699 aa19.18■□□□□ 0.66
HPS3-206ENST00000486530 BTBD2Q9BX70 525 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms