RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CTNSO60931 367 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 SNX4O95219 450 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 CD8BP10966 210 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 SLC25A16P16260 332 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 PPP3CBP16298 524 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 DPP4P27487 766 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 ARNTP27540 789 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 SERPINB3P29508 390 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 GRIA1P42261 906 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 RPL21P46778 160 aaKnown RBP7.42□□□□□ -1.22
XRN1-212ENST00000486211 KCNJ5P48544 419 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 GZMKP49863 264 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 LHX2P50458 406 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 NUDT6P53370 316 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 BTN3A2P78410 334 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 CDH17Q12864 832 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 CUL1Q13616 776 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 ABHD17CQ6PCB6 329 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 DARS2Q6PI48 645 aaKnown RBP7.42□□□□□ -1.22
XRN1-212ENST00000486211 SCIMPQ6UWF3 145 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 MBOAT1Q6ZNC8 495 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 LINC00523Q86TU6 105 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 DTX2Q86UW9 622 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 RCOR2Q8IZ40 523 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 LRRC17Q8N6Y2 441 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 SPPL2AQ8TCT8 520 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 DIO2Q92813 273 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 MSI2Q96DH6 328 aaKnown RBP7.42□□□□□ -1.22
XRN1-212ENST00000486211 TMEM41AQ96HV5 264 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 RUNDC3BQ96NL0 473 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 OR4K3Q96R72 315 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 KRT12Q99456 494 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 NPLQ9BXD5 320 aaPredicted RBP7.42□□□□□ -1.22
XRN1-212ENST00000486211 ALOXE3Q9BYJ1 711 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 KLHL4Q9C0H6 718 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 LACRTQ9GZZ8 138 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 TREX1Q9NSU2 369 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 MED16Q9Y2X0 877 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 RNF115Q9Y4L5 304 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 VWFP04275 2813 aa7.42□□□□□ -1.22
XRN1-212ENST00000486211 A0A0G2JN53 185 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 LOC100289279A0A1B0GTE1 492 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 A0A1W2PP18 115 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 URADA6NGE7 173 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 H3BMM5 538 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 LINC01387J3KSC0 135 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 HRKO00198 91 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 PJA2O43164 708 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 PSMD3O43242 534 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 EMC8O43402 210 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 ZBTB14O43829 449 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 KIAA0513O60268 411 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 FTCDO95954 541 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 ESR1P03372 595 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 SERPINA6P08185 405 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 MPC1LP0DKB6 136 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 PCSK2P16519 638 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 STARP49675 285 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 GFRA1P56159 465 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 CLDN18P56856 261 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 DSCR9P59020 149 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 ACTG1P63261 375 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 SIRPAP78324 504 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 NAE1Q13564 534 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 TOMM20Q15388 145 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 GUSBP1Q15486 140 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 SLC18A3Q16572 532 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 NRF1Q16656 503 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 ASTE1Q2TB18 679 aaPredicted RBP7.41□□□□□ -1.22
XRN1-212ENST00000486211 CR1LQ2VPA4 569 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 ZNF672Q499Z4 452 aaPredicted RBP7.41□□□□□ -1.22
XRN1-212ENST00000486211 TOR1AIP1Q5JTV8 583 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 TIGD3Q6B0B8 471 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 AGTRAPQ6RW13 159 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 CLEC2AQ6UVW9 174 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 STAC2Q6ZMT1 411 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 UBE2R2Q712K3 238 aaPredicted RBP7.41□□□□□ -1.22
XRN1-212ENST00000486211 TRIM42Q8IWZ5 723 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 ZNF525Q8N782 197 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 C10orf105Q8TEF2 133 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 PYCR2Q96C36 320 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 SENP5Q96HI0 755 aaPredicted RBP7.41□□□□□ -1.22
XRN1-212ENST00000486211 ZNF845Q96IR2 970 aaPredicted RBP7.41□□□□□ -1.22
XRN1-212ENST00000486211 NAP1L5Q96NT1 182 aaPredicted RBP7.41□□□□□ -1.22
XRN1-212ENST00000486211 CHRAC1Q9NRG0 131 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 TEX10Q9NXF1 929 aaPredicted RBP7.41□□□□□ -1.22
XRN1-212ENST00000486211 WWOXQ9NZC7 414 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 COPS7AQ9UBW8 275 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 B3GALT5Q9Y2C3 310 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 DLGAP4Q9Y2H0 992 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 RYR3Q15413 4870 aa7.41□□□□□ -1.22
XRN1-212ENST00000486211 MACROD2A1Z1Q3 448 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 FAM157AC9JC47 383 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 PAX4O43316 350 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 CREB1P16220 341 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 ZNF708P17019 499 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 TNNI3P19429 210 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 USF1P22415 310 aaPredicted RBP7.4□□□□□ -1.22
XRN1-212ENST00000486211 CCND1P24385 295 aa7.4□□□□□ -1.22
XRN1-212ENST00000486211 HNRNPH1P31943 449 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms