RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 TP53I11O14683 189 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 HCN1O60741 890 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 RBP1P09455 135 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 GABRA1P14867 456 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 CD1EP15812 388 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 KRT15P19012 456 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 TMED10P49755 219 aaKnown RBP12.21□□□□□ -0.45
UBA3-210ENST00000485424 NRG3P56975 720 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 RPP38P78345 283 aaKnown RBP12.21□□□□□ -0.45
UBA3-210ENST00000485424 GUCY2DQ02846 1103 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 IFT88Q13099 833 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 MYBPHQ13203 477 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 TRADDQ15628 312 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 SPRED3Q2MJR0 410 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 ZNF791Q3KP31 576 aaPredicted RBP12.21□□□□□ -0.45
UBA3-210ENST00000485424 TMEM198Q66K66 360 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 PAGE2Q7Z2X7 111 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 MYRIPQ8NFW9 859 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 PHF21BQ96EK2 531 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 TTYH2Q9BSA4 534 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 DOHHQ9BU89 302 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 WWTR1Q9GZV5 400 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 NOL11Q9H8H0 719 aaKnown RBP12.21□□□□□ -0.45
UBA3-210ENST00000485424 DDX31Q9H8H2 851 aaKnown RBP12.21□□□□□ -0.45
UBA3-210ENST00000485424 RNF11Q9Y3C5 154 aa12.21□□□□□ -0.45
UBA3-210ENST00000485424 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.21□□□□□ -0.45
UBA3-210ENST00000485424 A0A0A6YYD5 115 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 A0A1B0GVC2 190 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 LRRC14BA6NHZ5 514 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 HRKO00198 91 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 FOXE1O00358 373 aaPredicted RBP12.2□□□□□ -0.46
UBA3-210ENST00000485424 ZNF354AO60765 605 aaPredicted RBP12.2□□□□□ -0.46
UBA3-210ENST00000485424 GUCY1B2O75343 617 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 EEDO75530 441 aaKnown RBP12.2□□□□□ -0.46
UBA3-210ENST00000485424 URI1O94763 535 aaPredicted RBP12.2□□□□□ -0.46
UBA3-210ENST00000485424 SIX3O95343 332 aaPredicted RBP12.2□□□□□ -0.46
UBA3-210ENST00000485424 GBAP04062 536 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 IGKV3-11P04433 115 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 HOXD4P09016 255 aaPredicted RBP12.2□□□□□ -0.46
UBA3-210ENST00000485424 GDF1P27539 372 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 MASP1P48740 699 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 NEK2P51955 445 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 ART1P52961 327 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 HYAL4Q2M3T9 481 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 TSNAXIP1Q2TAA8 658 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 TECRLQ5HYJ1 363 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 TBCELQ5QJ74 424 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 C1orf185Q5T7R7 199 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 DGAT2L6Q6ZPD8 337 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 C17orf53Q8N3J3 647 aaPredicted RBP12.2□□□□□ -0.46
UBA3-210ENST00000485424 FBXW8Q8N3Y1 598 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 PTGR2Q8N8N7 351 aaPredicted RBP12.2□□□□□ -0.46
UBA3-210ENST00000485424 PAQR8Q8TEZ7 354 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 DIO2Q92813 273 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 LRRC46Q96FV0 321 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 ZNF597Q96LX8 424 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 CDK15Q96Q40 435 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 LRRC1Q9BTT6 524 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 TSPYL1Q9H0U9 437 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 ZFP64Q9NPA5 681 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 PSD3Q9NYI0 1048 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 KCNN3Q9UGI6 736 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 ASB4Q9Y574 426 aa12.2□□□□□ -0.46
UBA3-210ENST00000485424 A0A1W2PR48 441 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 TMPRSS11DO60235 418 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 KLK8O60259 260 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 SEMA3DO95025 777 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 ZWINTO95229 277 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 NADKO95544 446 aaPredicted RBP12.19□□□□□ -0.46
UBA3-210ENST00000485424 ACSL3O95573 720 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 AIFM1O95831 613 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 CELA3AP09093 270 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 FBXO45P0C2W1 286 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 SLC35E2P0CK97 266 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 NT5EP21589 574 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 GALNSP34059 522 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 BSGP35613 385 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 DEKP35659 375 aaKnown RBP12.19□□□□□ -0.46
UBA3-210ENST00000485424 SERPINB9P50453 376 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 SLC37A1P57057 533 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 FOXO1Q12778 655 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 EBPQ15125 230 aaKnown RBP12.19□□□□□ -0.46
UBA3-210ENST00000485424 TOMM20Q15388 145 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 KRTAP21-3Q3LHN1 58 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 CCNYL2Q5T2Q4 361 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 MRM1Q6IN84 353 aaKnown RBP12.19□□□□□ -0.46
UBA3-210ENST00000485424 ZNF572Q7Z3I7 529 aaPredicted RBP12.19□□□□□ -0.46
UBA3-210ENST00000485424 WDR53Q7Z5U6 358 aaPredicted RBP12.19□□□□□ -0.46
UBA3-210ENST00000485424 GALNT12Q8IXK2 581 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 L3MBTL4Q8NA19 623 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 OR10G3Q8NGC4 313 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 OR4K14Q8NGD5 310 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 WDR20Q8TBZ3 569 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 NRGNQ92686 78 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 KCNK17Q96T54 332 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 ELOVL6Q9H5J4 265 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 ACSS3Q9H6R3 686 aa12.19□□□□□ -0.46
UBA3-210ENST00000485424 ZNF703Q9H7S9 590 aaPredicted RBP12.19□□□□□ -0.46
UBA3-210ENST00000485424 SEMA4BQ9NPR2 832 aaPredicted RBP12.19□□□□□ -0.46
UBA3-210ENST00000485424 QPCTLQ9NXS2 382 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms