RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 SRSF11Q05519 484 aaKnown RBP17.74■□□□□ 0.43
SNX17-206ENST00000484886 C2orf80Q0P641 193 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 CHI3L2Q15782 390 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 HLA-DQA1Q5Y7H0 255 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.74■□□□□ 0.43
SNX17-206ENST00000484886 HOMEZQ8IX15 550 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 GPALPP1Q8IXQ4 340 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 LRRC25Q8N386 305 aaPredicted RBP17.74■□□□□ 0.43
SNX17-206ENST00000484886 ANKRD42Q8N9B4 389 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 PRR7Q8TB68 274 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 SLC22A8Q8TCC7 542 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 BARD1Q99728 777 aaKnown RBP17.74■□□□□ 0.43
SNX17-206ENST00000484886 TRIM45Q9H8W5 580 aaPredicted RBP17.74■□□□□ 0.43
SNX17-206ENST00000484886 TIMMDC1Q9NPL8 285 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 MIEF1Q9NQG6 463 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 C1orf109Q9NX04 203 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 KLF13Q9Y2Y9 288 aaPredicted RBP17.74■□□□□ 0.43
SNX17-206ENST00000484886 DNAJC15Q9Y5T4 150 aa17.74■□□□□ 0.43
SNX17-206ENST00000484886 UBR5O95071 2799 aaPredicted RBP17.74■□□□□ 0.43
SNX17-206ENST00000484886 OR6C76A6NM76 312 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 BIRC5O15392 142 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 CBX6O95503 412 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 CT62P0C5K7 136 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 EDN3P14138 238 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 SLC37A1P57057 533 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 EIF2S3LQ2VIR3 472 aaKnown RBP17.73■□□□□ 0.43
SNX17-206ENST00000484886 GALNTL6Q49A17 601 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 TNFAIP8L3Q5GJ75 292 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 HHATQ5VTY9 493 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 NOXRED1Q6NXP6 359 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 OPN5Q6U736 354 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 VWA5B2Q8N398 1253 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 ST6GALNAC3Q8NDV1 305 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 ADCY4Q8NFM4 1077 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 DNAJB8Q8NHS0 232 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 FAM76AQ8TAV0 307 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 NUBPLQ8TB37 319 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 NR4A3Q92570 626 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 WWTR1Q9GZV5 400 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 TUBB1Q9H4B7 451 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 SIRT5Q9NXA8 310 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 BCAP29Q9UHQ4 241 aa17.73■□□□□ 0.43
SNX17-206ENST00000484886 PIP5K1BO14986 540 aa17.72■□□□□ 0.43
SNX17-206ENST00000484886 SKAP2O75563 359 aaPredicted RBP17.72■□□□□ 0.43
SNX17-206ENST00000484886 ATP1B1P05026 303 aa17.72■□□□□ 0.43
SNX17-206ENST00000484886 SERPINE1P05121 402 aa17.72■□□□□ 0.43
SNX17-206ENST00000484886 FGF4P08620 206 aa17.72■□□□□ 0.43
SNX17-206ENST00000484886 RPL38P63173 70 aaKnown RBP17.72■□□□□ 0.43
SNX17-206ENST00000484886 MPEG1Q2M385 716 aa17.72■□□□□ 0.43
SNX17-206ENST00000484886 ZNF227Q86WZ6 799 aa17.72■□□□□ 0.43
SNX17-206ENST00000484886 SAMD14Q8IZD0 417 aaPredicted RBP17.72■□□□□ 0.43
SNX17-206ENST00000484886 OR2T11Q8NH01 316 aa17.72■□□□□ 0.43
SNX17-206ENST00000484886 C11orf24Q96F05 449 aaPredicted RBP17.72■□□□□ 0.43
SNX17-206ENST00000484886 CNRIP1Q96F85 164 aaPredicted RBP17.72■□□□□ 0.43
SNX17-206ENST00000484886 BBS4Q96RK4 519 aa17.72■□□□□ 0.43
SNX17-206ENST00000484886 SLX1AQ9BQ83 275 aa17.72■□□□□ 0.43
SNX17-206ENST00000484886 OR10A5Q9H207 317 aa17.72■□□□□ 0.43
SNX17-206ENST00000484886 MYNNQ9NPC7 610 aa17.72■□□□□ 0.43
SNX17-206ENST00000484886 CROCCQ5TZA2 2017 aa17.72■□□□□ 0.43
SNX17-206ENST00000484886 ESPL1Q14674 2120 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 C2orf92A0A1B0GVN3 265 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 TMEM114B3SHH9 223 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 KLRC4-KLRK1H3BQV0 150 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 LYPLA1O75608 230 aaPredicted RBP17.71■□□□□ 0.43
SNX17-206ENST00000484886 CLPSP04118 112 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 DDCP20711 480 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 PRPH2P23942 346 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 ARRB2P32121 409 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 MEOX1P50221 254 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 GPR85P60893 370 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 ALDH6A1Q02252 535 aaKnown RBP17.71■□□□□ 0.43
SNX17-206ENST00000484886 DUSP2Q05923 314 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 FUT7Q11130 342 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 MPP2Q14168 576 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 CASP8Q14790 479 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 EBPQ15125 230 aaKnown RBP17.71■□□□□ 0.43
SNX17-206ENST00000484886 LTB4RQ15722 352 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 PIGGQ5H8A4 983 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 FHL5Q5TD97 284 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 FAM111BQ6SJ93 734 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 RTL4Q6ZR62 310 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 RNF165Q6ZSG1 346 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 MDGA2Q7Z553 956 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 TICAM1Q8IUC6 712 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 CCDC116Q8IYX3 515 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 CPSF7Q8N684 471 aaKnown RBP17.71■□□□□ 0.43
SNX17-206ENST00000484886 PSD4Q8NDX1 1056 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 OR7G1Q8NGA0 311 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 MGARPQ8TDB4 240 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 METTL2AQ96IZ6 378 aaKnown RBP17.71■□□□□ 0.43
SNX17-206ENST00000484886 TSPAN10Q9H1Z9 355 aaPredicted RBP17.71■□□□□ 0.43
SNX17-206ENST00000484886 SLC35C2Q9NQQ7 365 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 MAT2BQ9NZL9 334 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 EHD3Q9NZN3 535 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 ZDHHC2Q9UIJ5 367 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 CCL27Q9Y4X3 112 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 SVILO95425 2214 aa17.71■□□□□ 0.43
SNX17-206ENST00000484886 TMEM120BA0PK00 339 aa17.7■□□□□ 0.42
SNX17-206ENST00000484886 PEX1O43933 1283 aa17.7■□□□□ 0.42
SNX17-206ENST00000484886 AGFG2O95081 481 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms