RNA–Protein interactions for RNA: ENST00000484478.5

PDCD6IP-212, Transcript of programmed cell death 6 interacting protein, humanhuman

TSL 4

Gene PDCD6IP, Length 596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-212ENST00000484478 ODC1P11926 461 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 TCP1P17987 556 aaKnown RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 ARF4P18085 180 aaPredicted RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 PTPN3P26045 913 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 ADSSP30520 456 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 CASP14P31944 242 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 CDH5P33151 784 aaPredicted RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 HOXD13P35453 343 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 MNDAP41218 407 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 SLC1A1P43005 524 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 NSFP46459 744 aaKnown RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 AIF1P55008 147 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 CDH8P55286 799 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 ARF3P61204 181 aaPredicted RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 POLR2FP61218 127 aaKnown RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 ARF1P84077 181 aaKnown RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 ILF2Q12905 390 aaKnown RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 PTPN14Q15678 1187 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 WHAMMP3Q1A5X7 153 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 PDLIM3Q53GG5 364 aaPredicted RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 DNAJC21Q5F1R6 531 aaKnown RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 MARCH8Q5T0T0 291 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 LRRC38Q5VT99 294 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 DMKNQ6E0U4 476 aaPredicted RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 C11orf63Q6NUN7 778 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 CXCL17Q6UXB2 119 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 CHST9Q7L1S5 443 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 MTERF4Q7Z6M4 381 aaKnown RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 KIAA1328Q86T90 577 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 METTL23Q86XA0 190 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 FAM131BQ86XD5 332 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 PSTKQ8IV42 348 aaKnown RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 ARHGAP18Q8N392 663 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 UBL4BQ8N7F7 174 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 CEP112Q8N8E3 955 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 EIF1ADQ8N9N8 165 aaKnown RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 TC2NQ8N9U0 490 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 TMEM35BQ8NCS4 154 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 MGARPQ8TDB4 240 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 NPRL2Q8WTW4 380 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 U2AF1L4Q8WU68 220 aaKnown RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 HSFY1Q96LI6 401 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 ZNF597Q96LX8 424 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 PPP1R2P1Q96PQ5 205 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 MAP3K3Q99759 626 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 NKX3-1Q99801 234 aaPredicted RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 FERMT1Q9BQL6 677 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 CBWD1Q9BRT8 395 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 FAM213AQ9BRX8 229 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 KIFC3Q9BVG8 833 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 TXLNGYQ9BZA5 131 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 TMEM117Q9H0C3 514 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 TSPYL1Q9H0U9 437 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 SLITRK2Q9H156 845 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 GANQ9H2C0 597 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 LHX5Q9H2C1 402 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 TUBB1Q9H4B7 451 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 SERINC1Q9NRX5 453 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 HOMER3Q9NSC5 361 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 COMMD8Q9NX08 183 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 TMCC3Q9ULS5 477 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 BARX2Q9UMQ3 279 aaPredicted RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 CLUHO75153 1309 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 SF3B1O75533 1304 aaKnown RBP eCLIP2.56□□□□□ -21e-8■■■■□ 26
PDCD6IP-212ENST00000484478 ADGRA3Q8IWK6 1321 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 PLXNB2O15031 1838 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 MYH7BA7E2Y1 1941 aa2.56□□□□□ -2
PDCD6IP-212ENST00000484478 BAZ2BQ9UIF8 2168 aaKnown RBP2.56□□□□□ -2
PDCD6IP-212ENST00000484478 C2orf81A6NN90 581 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 MYO1GB0I1T2 1018 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 CCDC188H7C350 402 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 TFECO14948 347 aaPredicted RBP2.55□□□□□ -2
PDCD6IP-212ENST00000484478 SNAP91O60641 907 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 RTN2O75298 545 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 FGF19O95750 216 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 HLA-DRAP01903 254 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 PRB2P02812 416 aaPredicted RBP2.55□□□□□ -2
PDCD6IP-212ENST00000484478 CCL5P13501 91 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 CYP11B1P15538 503 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 ALOX12P18054 663 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 WARSP23381 471 aaKnown RBP2.55□□□□□ -2
PDCD6IP-212ENST00000484478 PSMA4P25789 261 aaKnown RBP2.55□□□□□ -2
PDCD6IP-212ENST00000484478 CASP1P29466 404 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 TNNT3P45378 269 aaPredicted RBP2.55□□□□□ -2
PDCD6IP-212ENST00000484478 GCLMP48507 274 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 BPIFB3P59826 476 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 PRAMEP78395 509 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 CCZ1BP86790 482 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 CCZ1P86791 482 aaPredicted RBP2.55□□□□□ -2
PDCD6IP-212ENST00000484478 TFAMQ00059 246 aaKnown RBP2.55□□□□□ -2
PDCD6IP-212ENST00000484478 CDK3Q00526 305 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 MGAT3Q09327 533 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 PLD1Q13393 1074 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 FAM189A2Q15884 450 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 CCL14Q16627 93 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 ODF4Q2M2E3 257 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 RALGAPA1Q6GYQ0 2036 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 UGT3A1Q6NUS8 523 aa2.55□□□□□ -2
PDCD6IP-212ENST00000484478 SLC39A4Q6P5W5 647 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms