RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 OR4F3Q6IEY1 312 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 ZNF551Q7Z340 670 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-224ENST00000483359 GALNT16Q8N428 558 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 APCDD1LQ8NCL9 501 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 KAT2AQ92830 837 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 AMDHD1Q96NU7 426 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 DUSP26Q9BV47 211 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 CLMPQ9H6B4 373 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 CXorf21Q9HAI6 301 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 ATAD3AQ9NVI7 634 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 MAT2BQ9NZL9 334 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 TRIM33Q9UPN9 1127 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 TRBV11-1A0A0K0K1C0 115 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 TBX19O60806 448 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 SLC22A3O75751 556 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 SSTR4P31391 388 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 DGKQP52824 942 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 CLNS1AP54105 237 aaKnown RBP16.62■□□□□ 0.25
CPNE1-224ENST00000483359 TMEM107Q6UX40 140 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 KBTBD2Q8IY47 623 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 VWA5B2Q8N398 1253 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 SIRT6Q8N6T7 355 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 SIMC1Q8NDZ2 872 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 THAP3Q8WTV1 239 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-224ENST00000483359 ZNF764Q96H86 408 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-224ENST00000483359 SENP5Q96HI0 755 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-224ENST00000483359 ZBTB18Q99592 522 aa16.62■□□□□ 0.25
CPNE1-224ENST00000483359 EPG5Q9HCE0 2579 aa16.61■□□□□ 0.25
CPNE1-224ENST00000483359 A8MUI8 341 aa16.61■□□□□ 0.25
CPNE1-224ENST00000483359 PCSK2P16519 638 aa16.61■□□□□ 0.25
CPNE1-224ENST00000483359 GPC1P35052 558 aa16.61■□□□□ 0.25
CPNE1-224ENST00000483359 MANFP55145 182 aaKnown RBP16.61■□□□□ 0.25
CPNE1-224ENST00000483359 C21orf58P58505 322 aa16.61■□□□□ 0.25
CPNE1-224ENST00000483359 EXOSC7Q15024 291 aaKnown RBP16.61■□□□□ 0.25
CPNE1-224ENST00000483359 SPRED3Q2MJR0 410 aa16.61■□□□□ 0.25
CPNE1-224ENST00000483359 TRMT12Q53H54 448 aaKnown RBP16.61■□□□□ 0.25
CPNE1-224ENST00000483359 ANKRD46Q86W74 232 aa16.61■□□□□ 0.25
CPNE1-224ENST00000483359 C7orf57Q8NEG2 295 aa16.61■□□□□ 0.25
CPNE1-224ENST00000483359 BRIX1Q8TDN6 353 aaKnown RBP16.61■□□□□ 0.25
CPNE1-224ENST00000483359 ZNF721Q8TF20 911 aa16.61■□□□□ 0.25
CPNE1-224ENST00000483359 STON2Q8WXE9 905 aa16.61■□□□□ 0.25
CPNE1-224ENST00000483359 ZBED6CLQ96FA7 236 aaPredicted RBP16.61■□□□□ 0.25
CPNE1-224ENST00000483359 MAGED4Q96JG8 741 aa16.61■□□□□ 0.25
CPNE1-224ENST00000483359 CCDC167Q9P0B6 97 aa16.61■□□□□ 0.25
CPNE1-224ENST00000483359 COPS7AQ9UBW8 275 aa16.61■□□□□ 0.25
CPNE1-224ENST00000483359 ZNF223Q9UK11 482 aaPredicted RBP16.61■□□□□ 0.25
CPNE1-224ENST00000483359 SERPINA7P05543 415 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 ABCB1P08183 1280 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-224ENST00000483359 GPX3P22352 226 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 MC3RP41968 323 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 KIR3DL1P43629 444 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 ZNF628Q5EBL2 1059 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 FCRLBQ6BAA4 426 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 CLECL1Q8IZS7 167 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 MORN4Q8NDC4 146 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 FDCSPQ8NFU4 85 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 OR1N1Q8NGS0 311 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 M1APQ8TC57 530 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 TESCQ96BS2 214 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 COQ8BQ96D53 544 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 VMP1Q96GC9 406 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 FBXL20Q96IG2 436 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 NUDT9Q9BW91 350 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 BHLHE41Q9C0J9 482 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-224ENST00000483359 MMP25Q9NPA2 562 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 GPR83Q9NYM4 423 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 ZIM2Q9NZV7 527 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 MAPRE3Q9UPY8 281 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 NME6O75414 186 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-224ENST00000483359 ICAM2P13598 275 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 DDX5P17844 614 aaKnown RBP16.6■□□□□ 0.25
CPNE1-224ENST00000483359 SOX18P35713 384 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 ST13P50502 369 aaKnown RBP16.6■□□□□ 0.25
CPNE1-224ENST00000483359 CDK9P50750 372 aaKnown RBP16.6■□□□□ 0.25
CPNE1-224ENST00000483359 CLCN2P51788 898 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 GPR143P51810 404 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 MGAT2Q10469 447 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 SQLEQ14534 574 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 IRAK1BP1Q5VVH5 260 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 SZRD1Q7Z422 152 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 CAMKMTQ7Z624 323 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 APLFQ8IW19 511 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-224ENST00000483359 LHPPQ9H008 270 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 EPN3Q9H201 632 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 LIN28AQ9H9Z2 209 aaKnown RBP16.6■□□□□ 0.25
CPNE1-224ENST00000483359 PTGFRNQ9P2B2 879 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 BCAP29Q9UHQ4 241 aa16.6■□□□□ 0.25
CPNE1-224ENST00000483359 NBEAQ8NFP9 2946 aa16.59■□□□□ 0.25
CPNE1-224ENST00000483359 A0A1W2PRB8 838 aa16.59■□□□□ 0.25
CPNE1-224ENST00000483359 PRKNO60260 465 aaPredicted RBP16.59■□□□□ 0.25
CPNE1-224ENST00000483359 SNX3O60493 162 aa16.59■□□□□ 0.25
CPNE1-224ENST00000483359 C6orf47O95873 294 aa16.59■□□□□ 0.25
CPNE1-224ENST00000483359 IGKV3-11P04433 115 aa16.59■□□□□ 0.25
CPNE1-224ENST00000483359 CD1EP15812 388 aa16.59■□□□□ 0.25
CPNE1-224ENST00000483359 GALNSP34059 522 aa16.59■□□□□ 0.25
CPNE1-224ENST00000483359 POLE2P56282 527 aa16.59■□□□□ 0.25
CPNE1-224ENST00000483359 PHC1P78364 1004 aa16.59■□□□□ 0.25
CPNE1-224ENST00000483359 UBAP2LQ14157 1087 aaKnown RBP16.59■□□□□ 0.25
CPNE1-224ENST00000483359 TIGD2Q4W5G0 525 aa16.59■□□□□ 0.25
CPNE1-224ENST00000483359 B3GNTL1Q67FW5 361 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms