RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 LIMS1P48059 325 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 ZNF91Q05481 1191 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 NCF4Q15080 339 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 TEAD4Q15561 434 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 TPGS2Q68CL5 300 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 USP30Q70CQ3 517 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 NPAS3Q8IXF0 933 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 ASB11Q8WXH4 323 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 PHF21AQ96BD5 680 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 SCRN2Q96FV2 425 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 PKP4Q99569 1192 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 PIP5K1AQ99755 562 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 SUV39H2Q9H5I1 410 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 B4GALT6Q9UBX8 382 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 GON4LQ3T8J9 2241 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 ABHD14A-ACY1A0A1B0GW23 586 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 TMEM202A6NGA9 273 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 ISM1B1AKI9 464 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 HPGDSO60760 199 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 TPPPO94811 219 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 APOL3O95236 402 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 AGFG1P52594 562 aaKnown RBP13.57□□□□□ -0.24
COL9A2-207ENST00000482722 HBA1P69905 142 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 UBE3AQ05086 875 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 C1DQ13901 141 aaKnown RBP13.57□□□□□ -0.24
COL9A2-207ENST00000482722 IL18Q14116 193 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 FCN2Q15485 313 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 MEDAGQ5VYS4 303 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 ZNF730Q6ZMV8 503 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 CDH24Q86UP0 819 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 SDR16C5Q8N3Y7 309 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 CELF5Q8N6W0 485 aaKnown RBP13.57□□□□□ -0.24
COL9A2-207ENST00000482722 ZNF366Q8N895 744 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 L3MBTL4Q8NA19 623 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 PROKR2Q8NFJ6 384 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 ZNF431Q8TF32 576 aaPredicted RBP13.57□□□□□ -0.24
COL9A2-207ENST00000482722 SORCS1Q8WY21 1168 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 ING5Q8WYH8 240 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 KCTD7Q96MP8 289 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 SAMD11Q96NU1 681 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 SPNS1Q9H2V7 528 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 BRD9Q9H8M2 597 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 CERS4Q9HA82 394 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 THSD1Q9NS62 852 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 ZNF224Q9NZL3 707 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 STOML2Q9UJZ1 356 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 RAB23Q9ULC3 237 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 MGAT4AQ9UM21 535 aa13.57□□□□□ -0.24
COL9A2-207ENST00000482722 ATP6V1G2-DDX39BF2Z307 99 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 SAP18O00422 153 aaKnown RBP13.56□□□□□ -0.24
COL9A2-207ENST00000482722 SCAMP2O15127 329 aaKnown RBP13.56□□□□□ -0.24
COL9A2-207ENST00000482722 CBSLP0DN79 551 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 CBSP35520 551 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 IRS1P35568 1242 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 XCR1P46094 333 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 SNRPD1P62314 119 aaKnown RBP13.56□□□□□ -0.24
COL9A2-207ENST00000482722 RPS25P62851 125 aaKnown RBP13.56□□□□□ -0.24
COL9A2-207ENST00000482722 CCSMST1Q4G0I0 132 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 MPPE1Q53F39 396 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 ZNF385BQ569K4 471 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 Q6ZVU0 165 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 PLEKHM3Q6ZWE6 761 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 COMMD7Q86VX2 200 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 TMEM25Q86YD3 366 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 TCEAL8Q8IYN2 117 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 LILRA3Q8N6C8 439 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-207ENST00000482722 CHST14Q8NCH0 376 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 TMEM43Q9BTV4 400 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 TSSK6Q9BXA6 273 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 RWDD3Q9Y3V2 267 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 PCDHGB7Q9Y5F8 929 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 SPIN1Q9Y657 262 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-207ENST00000482722 MGAT4DA6NG13 374 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 GTPBP1O00178 669 aaKnown RBP13.56□□□□□ -0.24
COL9A2-207ENST00000482722 TSPAN4O14817 238 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 LRG1P02750 347 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 C8GP07360 202 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 ATP1B2P14415 290 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-207ENST00000482722 DDCP20711 480 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 PBLDP30039 288 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-207ENST00000482722 MAPK8P45983 427 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 PREPP48147 710 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 MC1RQ01726 317 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 NAE1Q13564 534 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 SCARB2Q14108 478 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 ANGPT1Q15389 498 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 CCDC85BQ15834 202 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-207ENST00000482722 METTL2BQ6P1Q9 378 aaKnown RBP13.56□□□□□ -0.24
COL9A2-207ENST00000482722 FAM122CQ6P4D5 195 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 TAGAPQ8N103 731 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 BADQ92934 168 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 CIDECQ96AQ7 238 aaPredicted RBP13.56□□□□□ -0.24
COL9A2-207ENST00000482722 C1GALT1C1Q96EU7 318 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 SOSTQ9BQB4 213 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 C11orf49Q9H6J7 331 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 CDH10Q9Y6N8 788 aa13.56□□□□□ -0.24
COL9A2-207ENST00000482722 GRXCR1A8MXD5 290 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 PSIP1O75475 530 aaKnown RBP13.55□□□□□ -0.24
COL9A2-207ENST00000482722 JUPP14923 745 aa13.55□□□□□ -0.24
COL9A2-207ENST00000482722 TALDO1P37837 337 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms