RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 EPN2O95208 641 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 ABCB1P08183 1280 aaPredicted RBP7.34□□□□□ -1.23
SNX13-208ENST00000482558 UBL4AP11441 157 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 CKMT2P17540 419 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 SDC1P18827 310 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 CDH2P19022 906 aaPredicted RBP7.34□□□□□ -1.23
SNX13-208ENST00000482558 SDHBP21912 280 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 CXCR2P25025 360 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 OXTRP30559 389 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 GCH1P30793 250 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 TLX1P31314 330 aaPredicted RBP7.34□□□□□ -1.23
SNX13-208ENST00000482558 KCNJ5P48544 419 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 DGKQP52824 942 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 ARSFP54793 590 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 OR4D2P58180 307 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 MTPNP58546 118 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 TLE1Q04724 770 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 GK3PQ14409 553 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 ARHGAP19Q14CB8 494 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 CCNYL2Q5T2Q4 361 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 GARNL3Q5VVW2 1013 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 TMEM215Q68D42 235 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 MED27Q6P2C8 311 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 NEK5Q6P3R8 708 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 TMEM220Q6QAJ8 160 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 SUSD1Q6UWL2 747 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 FAM83HQ6ZRV2 1179 aaPredicted RBP7.34□□□□□ -1.23
SNX13-208ENST00000482558 DET1Q7L5Y6 550 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 GRASPQ7Z6J2 395 aaPredicted RBP7.34□□□□□ -1.23
SNX13-208ENST00000482558 SYT12Q8IV01 421 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 SLC30A8Q8IWU4 369 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 YAF2Q8IY57 180 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 ZCCHC7Q8N3Z6 543 aaKnown RBP7.34□□□□□ -1.23
SNX13-208ENST00000482558 RAB42Q8N4Z0 105 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 POMGNT2Q8NAT1 580 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 ZNF555Q8NEP9 628 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 OR10A6Q8NH74 314 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 WDR20Q8TBZ3 569 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 CFHR4Q92496 578 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 SMG7Q92540 1137 aaKnown RBP7.34□□□□□ -1.23
SNX13-208ENST00000482558 SMARCD2Q92925 531 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 BADQ92934 168 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 SCAMP4Q969E2 229 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 RAB24Q969Q5 203 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 ZNF707Q96C28 371 aaPredicted RBP7.34□□□□□ -1.23
SNX13-208ENST00000482558 NUS1Q96E22 293 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 DTNBP1Q96EV8 351 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 NRBF2Q96F24 287 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 SLC47A1Q96FL8 570 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 VPS50Q96JG6 964 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 CPPED1Q9BRF8 314 aaPredicted RBP7.34□□□□□ -1.23
SNX13-208ENST00000482558 FUZQ9BT04 418 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 SFXN1Q9H9B4 322 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 AHSPQ9NZD4 102 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 VAPAQ9P0L0 249 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 STOX2Q9P2F5 926 aaPredicted RBP7.34□□□□□ -1.23
SNX13-208ENST00000482558 ZNHIT2Q9UHR6 403 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 CD84Q9UIB8 345 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 C3orf18Q9UK00 162 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 BAG5Q9UL15 447 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 FADS3Q9Y5Q0 445 aa7.34□□□□□ -1.23
SNX13-208ENST00000482558 PTPRSQ13332 1948 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 ANKRD12Q6UB98 2062 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 KRT87PA6NCN2 255 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 MGAT4DA6NG13 374 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 ARHGEF33A8MVX0 844 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 MAGEB17A8MXT2 336 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 C9JVG2 144 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 G3V2T6 193 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 DFNA5O60443 496 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 C1orf105O95561 183 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 APBB3O95704 486 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 CST1P01037 141 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 CTSLP07711 333 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 THRBP10828 461 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 COX7A2P14406 83 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 NCK1P16333 377 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 EPCAMP16422 314 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 CEBPBP17676 345 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 GPX2P18283 190 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 KELP23276 732 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 EPHA8P29322 1005 aaPredicted RBP7.33□□□□□ -1.24
SNX13-208ENST00000482558 MTHFRP42898 656 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 GPR1P46091 355 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 ALDH3B2P48448 385 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 ADARB1P78563 741 aaKnown RBP7.33□□□□□ -1.24
SNX13-208ENST00000482558 TARDBPQ13148 414 aaKnown RBP eCLIP7.33□□□□□ -1.247e-7■■■■□ 23
SNX13-208ENST00000482558 DCTN2Q13561 401 aaKnown RBP7.33□□□□□ -1.24
SNX13-208ENST00000482558 NAE1Q13564 534 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 DOC2AQ14183 400 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 RBBP5Q15291 538 aaKnown RBP7.33□□□□□ -1.24
SNX13-208ENST00000482558 RBM48Q5RL73 367 aaKnown RBP7.33□□□□□ -1.24
SNX13-208ENST00000482558 CPTPQ5TA50 214 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 RPTNQ6XPR3 784 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 ERN2Q76MJ5 926 aaKnown RBP7.33□□□□□ -1.24
SNX13-208ENST00000482558 PARS2Q7L3T8 475 aaKnown RBP7.33□□□□□ -1.24
SNX13-208ENST00000482558 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.33□□□□□ -1.24
SNX13-208ENST00000482558 SATL1Q86VE3 508 aa7.33□□□□□ -1.24
SNX13-208ENST00000482558 RALGPS2Q86X27 583 aaPredicted RBP7.33□□□□□ -1.24
SNX13-208ENST00000482558 VRK3Q8IV63 474 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms