RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 CORO1CQ9ULV4 474 aaPredicted RBP12.18□□□□□ -0.46
NDC1-202ENST00000480952 NINQ8N4C6 2090 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 C2orf92A0A1B0GVN3 265 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 NCF1BA6NI72 391 aaPredicted RBP12.17□□□□□ -0.46
NDC1-202ENST00000480952 OR6C76A6NM76 312 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 NCF1CA8MVU1 366 aaPredicted RBP12.17□□□□□ -0.46
NDC1-202ENST00000480952 OR10H2O60403 315 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 SH3BGRLO75368 114 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 SMNDC1O75940 238 aaKnown RBP eCLIP12.17□□□□□ -0.46
NDC1-202ENST00000480952 NCF1P14598 390 aaPredicted RBP12.17□□□□□ -0.46
NDC1-202ENST00000480952 CRYGSP22914 178 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 TLX1P31314 330 aaPredicted RBP12.17□□□□□ -0.46
NDC1-202ENST00000480952 CASP3P42574 277 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 SSR2P43308 183 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 ZNF75DP51815 510 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 SLC37A1P57057 533 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 PCDH1Q08174 1060 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 DMTNQ08495 405 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 SLAMF1Q13291 335 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 DOC2AQ14183 400 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 SETDB1Q15047 1291 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 TMEM35AQ53FP2 167 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 SPANXN3Q5MJ09 141 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 TEDDM1Q5T9Z0 273 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 HLA-DQA1Q5Y7H0 255 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 TIGD3Q6B0B8 471 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 HEPHL1Q6MZM0 1159 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 TTC27Q6P3X3 843 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 SCIMPQ6UWF3 145 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 ENPP6Q6UWR7 440 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 PLXDC2Q6UX71 529 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 GALNT7Q86SF2 657 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 TMEM139Q8IV31 216 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 ST13P4Q8IZP2 240 aaPredicted RBP12.17□□□□□ -0.46
NDC1-202ENST00000480952 NKAPQ8N5F7 415 aaKnown RBP12.17□□□□□ -0.46
NDC1-202ENST00000480952 NAT8LQ8N9F0 302 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 SNX31Q8N9S9 440 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 OR1J4Q8NGS1 313 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 RIT1Q92963 219 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 TP53INP1Q96A56 240 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 PTCD3Q96EY7 689 aaKnown RBP12.17□□□□□ -0.46
NDC1-202ENST00000480952 TMEM41AQ96HV5 264 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 VPS39Q96JC1 886 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 FAM111AQ96PZ2 611 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 PHACTR1Q9C0D0 580 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 RBSNQ9H1K0 784 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 SNX15Q9NRS6 342 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 DNAJC11Q9NVH1 559 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 MS4A12Q9NXJ0 267 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 CTNNAL1Q9UBT7 734 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 FETUBQ9UGM5 382 aa12.17□□□□□ -0.46
NDC1-202ENST00000480952 SAP18O00422 153 aaKnown RBP12.16□□□□□ -0.46
NDC1-202ENST00000480952 MSTNO14793 375 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 PRAMEF4O60810 478 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 ZNF37AP17032 561 aaPredicted RBP12.16□□□□□ -0.46
NDC1-202ENST00000480952 PTPN6P29350 595 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 TMED10P49755 219 aaKnown RBP12.16□□□□□ -0.46
NDC1-202ENST00000480952 NRG3P56975 720 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 TNK1Q13470 666 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 LAPTM5Q13571 262 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 TSNQ15631 228 aaKnown RBP12.16□□□□□ -0.46
NDC1-202ENST00000480952 SPRED3Q2MJR0 410 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 KBTBD12Q3ZCT8 623 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 PAGE2BQ5JRK9 111 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 PRAMEF9Q5VWM5 478 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 ADAMTSL2Q86TH1 951 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 MEIOBQ8N635 442 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 TMEM171Q8WVE6 324 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 MAGOHBQ96A72 148 aaKnown RBP12.16□□□□□ -0.46
NDC1-202ENST00000480952 CERS2Q96G23 380 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 UCN2Q96RP3 112 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 PELOQ9BRX2 385 aaKnown RBP12.16□□□□□ -0.46
NDC1-202ENST00000480952 EFCAB11Q9BUY7 163 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 CNOT10Q9H9A5 744 aaKnown RBP12.16□□□□□ -0.46
NDC1-202ENST00000480952 WWOXQ9NZC7 414 aa12.16□□□□□ -0.46
NDC1-202ENST00000480952 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 A0A1W2PNV4 684 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 CDH16O75309 829 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 TNFSF13O75888 250 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 SCELO95171 688 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 GPR75O95800 540 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 TGFB1P01137 390 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 TP53P04637 393 aaPredicted RBP12.15□□□□□ -0.46
NDC1-202ENST00000480952 KRT15P19012 456 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 CHMP24386 653 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 CXCR5P32302 372 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 CD79BP40259 229 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 NR1H2P55055 460 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 KRTAP1-1Q07627 177 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 C18orf63Q68DL7 685 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 OR4C11Q6IEV9 310 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 ANGPTL8Q6UXH0 198 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 ADGRE4PQ86SQ3 457 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 GPR180Q86V85 440 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 GRAMD2AQ8IUY3 354 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 TRIM42Q8IWZ5 723 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 PPIL6Q8IXY8 311 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 OR14L1PQ8NHC6 308 aa12.15□□□□□ -0.46
NDC1-202ENST00000480952 ZNF473Q8WTR7 871 aaKnown RBP12.15□□□□□ -0.46
NDC1-202ENST00000480952 ZC3HAV1LQ96H79 300 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms