RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 EMID1Q96A84 441 aaPredicted RBP9.15□□□□□ -0.94
VEGFA-212ENST00000480614 NECTIN4Q96NY8 510 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 IL7P13232 177 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF182P17025 639 aaPredicted RBP9.15□□□□□ -0.94
VEGFA-212ENST00000480614 FBLP22087 321 aaKnown RBP9.15□□□□□ -0.94
VEGFA-212ENST00000480614 ALDH3B2P48448 385 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 SSTP61278 116 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 DGKZQ13574 1117 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 CDNFQ49AH0 187 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 TMEM205Q6UW68 189 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 NSUN3Q9H649 340 aaKnown RBP9.15□□□□□ -0.94
VEGFA-212ENST00000480614 HSD17B7P56937 341 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 GPR137CQ8N3F9 429 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 GLYATL1Q969I3 302 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 CHD5Q8TDI0 1954 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 TTC24A2A3L6 582 aaPredicted RBP9.15□□□□□ -0.94
VEGFA-212ENST00000480614 AURKAO14965 403 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 CD63P08962 238 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 ADRB3P13945 408 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 BTBD16Q32M84 506 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 TCEANCQ8N8B7 351 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 HERC2P3Q9BVR0 1158 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 NLE1Q9NVX2 485 aaPredicted RBP9.15□□□□□ -0.94
VEGFA-212ENST00000480614 TMEM45AQ9NWC5 275 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 KIAA2026Q5HYC2 2103 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 C17orf113A0A1B0GUU1 675 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 ART1P52961 327 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 CYCSP99999 105 aaKnown RBP9.15□□□□□ -0.94
VEGFA-212ENST00000480614 MAELQ96JY0 434 aaKnown RBP9.15□□□□□ -0.94
VEGFA-212ENST00000480614 ABRACLQ9P1F3 81 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 PPM1HQ9ULR3 514 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 MDFIC2A0A1B0GVS7 189 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 RFPL1O75677 317 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 UCHL1P09936 223 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 ZNF81P51508 661 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 AKR1C8PQ5T2L2 129 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 SLC39A4Q6P5W5 647 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 WDR53Q7Z5U6 358 aaPredicted RBP9.15□□□□□ -0.94
VEGFA-212ENST00000480614 VTCN1Q7Z7D3 282 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 KBTBD6Q86V97 674 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 TEX26Q8N6G2 289 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 OR4F6Q8NGB9 312 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 OR8J1Q8NGP2 316 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.15□□□□□ -0.947e-11■■■■□ 21.2
VEGFA-212ENST00000480614 GATAD2BQ8WXI9 593 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 SGTBQ96EQ0 304 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 DEFB126Q9BYW3 111 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 TMEM185BQ9H7F4 350 aa9.15□□□□□ -0.94
VEGFA-212ENST00000480614 TRBV2A0A0J9YWF9 115 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 OPN1SWP03999 348 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 TMEM53Q6P2H8 277 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 ASCC1Q8N9N2 400 aaKnown RBP9.15□□□□□ -0.95
VEGFA-212ENST00000480614 OR5H2Q8NGV7 314 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 CCDC32Q9BV29 185 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 SDHAF2Q9NX18 166 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 FBXL3Q9UKT7 428 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 A0A0U1RQF3 1178 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 TMEM63AO94886 807 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 SCAF4O95104 1147 aaKnown RBP9.15□□□□□ -0.95
VEGFA-212ENST00000480614 MMP2P08253 660 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 TNFSF4P23510 183 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 ERVK-16P61578 105 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 ECH1Q13011 328 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 SPANXN4Q5MJ08 99 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 KIAA0907Q7Z7F0 614 aaPredicted RBP9.15□□□□□ -0.95
VEGFA-212ENST00000480614 MS4A15Q8N5U1 240 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 SPRYD4Q8WW59 207 aaPredicted RBP9.15□□□□□ -0.95
VEGFA-212ENST00000480614 SPTSSAQ969W0 71 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 CHFRQ96EP1 664 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 MTG2Q9H4K7 406 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 MAGEA3P43357 314 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 RIDAP52758 137 aaKnown RBP9.15□□□□□ -0.95
VEGFA-212ENST00000480614 RRAS2P62070 204 aaPredicted RBP9.15□□□□□ -0.95
VEGFA-212ENST00000480614 DDIT4LQ96D03 193 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 SLC45A3Q96JT2 553 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 TXN2Q99757 166 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 SFXN1Q9H9B4 322 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 MGAT4CQ9UBM8 478 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 UBE2J1Q9Y385 318 aaPredicted RBP9.15□□□□□ -0.95
VEGFA-212ENST00000480614 INSL5Q9Y5Q6 135 aa9.15□□□□□ -0.95
VEGFA-212ENST00000480614 CKMT2P17540 419 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 CHRNA4P43681 627 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 GSG1LQ6UXU4 331 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 CLEC4CQ8WTT0 213 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 RRNAD1Q96FB5 475 aaKnown RBP9.14□□□□□ -0.95
VEGFA-212ENST00000480614 C1orf74Q96LT6 269 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 ZNF442Q9H7R0 627 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 BHMG1C9JSJ3 638 aaPredicted RBP9.14□□□□□ -0.95
VEGFA-212ENST00000480614 GABRA3P34903 492 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 GGT2P36268 569 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 ACVRL1P37023 503 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 PLD6Q8N2A8 252 aaKnown RBP9.14□□□□□ -0.95
VEGFA-212ENST00000480614 OR8S1Q8NH09 359 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 TGM7Q96PF1 710 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 APOBEC3GQ9HC16 384 aaKnown RBP9.14□□□□□ -0.95
VEGFA-212ENST00000480614 ACOT13Q9NPJ3 140 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 FAM230AA0A1W2PPH8 454 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 OR51F1A6NGY5 319 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 SPATC1Q76KD6 591 aa9.14□□□□□ -0.95
VEGFA-212ENST00000480614 Q8N9G6 341 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms