RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CMSS1Q9BQ75 279 aaKnown RBP20.17■□□□□ 0.82
SDF4-206ENST00000478938 TMED9Q9BVK6 235 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 EBPLQ9BY08 206 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 TPT1P8Q9HAU6 139 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 UTRNP46939 3433 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 HEPACAM2A8MVW5 462 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 ZNF593O00488 134 aaPredicted RBP20.17■□□□□ 0.82
SDF4-206ENST00000478938 SOCS7O14512 581 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 GATBO75879 557 aaKnown RBP20.17■□□□□ 0.82
SDF4-206ENST00000478938 ARIH2O95376 493 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 CD79BP40259 229 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 PREPP48147 710 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 AFF1P51825 1210 aaKnown RBP20.17■□□□□ 0.82
SDF4-206ENST00000478938 MC2RQ01718 297 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 CPSF6Q16630 551 aaKnown RBP eCLIP20.17■□□□□ 0.82
SDF4-206ENST00000478938 IFI44LQ53G44 452 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 PLEKHH3Q7Z736 793 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 MARCH9Q86YJ5 346 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 ARRDC2Q8TBH0 407 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 SFT2D1Q8WV19 159 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 FCRL1Q96LA6 429 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 DNTTIP1Q9H147 329 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 MRTO4Q9UKD2 239 aaKnown RBP20.17■□□□□ 0.82
SDF4-206ENST00000478938 PRKAB1Q9Y478 270 aa20.17■□□□□ 0.82
SDF4-206ENST00000478938 C2orf92A0A1B0GVN3 265 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 PLSCR5A0PG75 271 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 GNB5O14775 395 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 PEX10O60683 326 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 SLC19A2O60779 497 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 SDC3O75056 442 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 TFP02787 698 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 DRD5P21918 477 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 GKP32189 559 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 WNT4P56705 351 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 ALG1LQ6GMV1 187 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 C5orf46Q6UWT4 87 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 FGD2Q7Z6J4 655 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 HMCESQ96FZ2 354 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 STARD7Q9NQZ5 370 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 OTOFQ9HC10 1997 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 YY2O15391 372 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 FGF10O15520 208 aaPredicted RBP20.16■□□□□ 0.82
SDF4-206ENST00000478938 PCDH7O60245 1069 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 C22orf31O95567 290 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 EIF4EP06730 217 aaKnown RBP20.16■□□□□ 0.82
SDF4-206ENST00000478938 HMBSP08397 361 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 CTPS1P17812 591 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 C4BPBP20851 252 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 HLXQ14774 488 aaPredicted RBP20.16■□□□□ 0.82
SDF4-206ENST00000478938 SLC36A2Q495M3 483 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 PAN3Q58A45 887 aaKnown RBP20.16■□□□□ 0.82
SDF4-206ENST00000478938 TMEM201Q5SNT2 666 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 ARTNQ5T4W7 220 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 PSAPL1Q6NUJ1 521 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 NEIL3Q8TAT5 605 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 ADAMTS14Q8WXS8 1223 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 C10orf90Q96M02 699 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 SMIM14Q96QK8 99 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 TBC1D17Q9HA65 648 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 NMUR1Q9HB89 426 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 PDGFCQ9NRA1 345 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 DNAJC11Q9NVH1 559 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 NKIRAS2Q9NYR9 191 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 HACL1Q9UJ83 578 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 SLC22A7Q9Y694 548 aa20.16■□□□□ 0.82
SDF4-206ENST00000478938 ANKDD1BA6NHY2 528 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 EIF1BO60739 113 aaKnown RBP20.15■□□□□ 0.82
SDF4-206ENST00000478938 GADD45GO95257 159 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 RAB36O95755 333 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 PDYNP01213 254 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 ZNF806P0C7X5 589 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 EIF1P41567 113 aaKnown RBP20.15■□□□□ 0.82
SDF4-206ENST00000478938 SIM1P81133 766 aaPredicted RBP20.15■□□□□ 0.82
SDF4-206ENST00000478938 RIPPLY1Q0D2K3 151 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 TTLL4Q14679 1199 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 ZRANB3Q5FWF4 1079 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 IDNKQ5T6J7 187 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 AFMIDQ63HM1 303 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 OR4K2Q8NGD2 314 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 OR6S1Q8NH40 331 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 WDR89Q96FK6 387 aaPredicted RBP20.15■□□□□ 0.82
SDF4-206ENST00000478938 APOL5Q9BWW9 433 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 A0A0G2JPF8 293 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 HNRNPCL3B7ZW38 293 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 DVL2O14641 736 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 HNRNPCL4P0DMR1 293 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 ACADLP28330 430 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 GABRA5P31644 462 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 MELKQ14680 651 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 Q6ZTK2 550 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 USP50Q70EL3 339 aaPredicted RBP20.15■□□□□ 0.82
SDF4-206ENST00000478938 PDZD9Q8IXQ8 264 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 IQCF1Q8N6M8 205 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 APOLD1Q96LR9 279 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 OR4K3Q96R72 315 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 EGFL8Q99944 293 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 DCAF16Q9NXF7 216 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 KLK14Q9P0G3 267 aa20.15■□□□□ 0.82
SDF4-206ENST00000478938 OR6C75A6NL08 312 aa20.14■□□□□ 0.82
SDF4-206ENST00000478938 H3BN98 237 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms