RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 CCDC153Q494R4 210 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 TCHHL1Q5QJ38 904 aaPredicted RBP21.62■■□□□ 1.05
C9orf3-215ENST00000478473 GALNT12Q8IXK2 581 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 C1orf52Q8N6N3 182 aaKnown RBP21.62■■□□□ 1.05
C9orf3-215ENST00000478473 OR7G1Q8NGA0 311 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 RDH11Q8TC12 318 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 AGAP11Q8TF27 550 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 UBLCP1Q8WVY7 318 aaPredicted RBP21.62■■□□□ 1.05
C9orf3-215ENST00000478473 DMRTA2Q96SC8 542 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 MCM8Q9UJA3 840 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 GRID1Q9ULK0 1009 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 ENTPD4Q9Y227 616 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 PCNX1Q96RV3 2341 aa21.62■■□□□ 1.05
C9orf3-215ENST00000478473 A0A0G2JMM0 328 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 A0A1W2PPB8 328 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 A0A1W2PRS3 328 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 KIR3DP1A8MWS1 328 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 E9PLN8 166 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 PLIN3O60664 434 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 CDH16O75309 829 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 IGHG3P01860 377 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 CT62P0C5K7 136 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 CCL3P10147 92 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 PORP16435 677 aaPredicted RBP21.61■■□□□ 1.05
C9orf3-215ENST00000478473 ABOP16442 354 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 RFC3P40938 356 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 SLC18A2Q05940 514 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 MGAT2Q10469 447 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 MAP4K2Q12851 820 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 ARHGAP11AQ6P4F7 1023 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 MRGPRGQ86SM5 289 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 SLC22A16Q86VW1 577 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 OR52N2Q8NGI0 321 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 FAM57AQ8TBR7 257 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 ADIPOR1Q96A54 375 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 CTHRC1Q96CG8 243 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 ZNF681Q96N22 645 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 PHF12Q96QT6 1004 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 HBEGFQ99075 208 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 VKORC1Q9BQB6 163 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 TTTY12Q9BZ98 90 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 ACPTQ9BZG2 426 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 IL1RL2Q9HB29 575 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 CNIH4Q9P003 139 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 ZNF639Q9UID6 485 aa21.61■■□□□ 1.05
C9orf3-215ENST00000478473 CCDC151A5D8V7 595 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 GOLGA6L10A6NI86 522 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 UBFD1O14562 309 aaKnown RBP21.6■■□□□ 1.05
C9orf3-215ENST00000478473 PRRG2O14669 202 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 MYL2P10916 166 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 CHN1P15882 459 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 SERPINB3P29508 390 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 HMOX2P30519 316 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 SSTR4P31391 388 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 PTGS2P35354 604 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 SOX18P35713 384 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 HTR6P50406 440 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 PPIAP62937 165 aaKnown RBP21.6■■□□□ 1.05
C9orf3-215ENST00000478473 NTRK2Q16620 822 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 PRICKLE4Q2TBC4 344 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 FAM219BQ5XKK7 198 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 SLC22A10Q63ZE4 541 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 ZNF787Q6DD87 383 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 EID3Q8N140 333 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 PROK2Q9HC23 129 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 PSME2Q9UL46 239 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 CHCHD2Q9Y6H1 151 aaPredicted RBP21.6■■□□□ 1.05
C9orf3-215ENST00000478473 TEX15Q9BXT5 2789 aa21.6■■□□□ 1.05
C9orf3-215ENST00000478473 A0A1B0GTH9 108 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 A0A1B0GVC2 190 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 C2orf92A0A1B0GVN3 265 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 ANKRD33BA6NCL7 494 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 FOXO6A8MYZ6 492 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 ACOT7O00154 380 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 P04436 131 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 DRD2P14416 443 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 CSNK2A2P19784 350 aaPredicted RBP21.59■■□□□ 1.05
C9orf3-215ENST00000478473 SLCO1A2P46721 670 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 RAE1P78406 368 aaKnown RBP21.59■■□□□ 1.05
C9orf3-215ENST00000478473 SPIN4Q56A73 249 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 PAOXQ6QHF9 649 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 FBXW8Q8N3Y1 598 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 DOK4Q8TEW6 326 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 SREK1Q8WXA9 508 aaKnown RBP21.59■■□□□ 1.05
C9orf3-215ENST00000478473 NTNG2Q96CW9 530 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 FAIM2Q9BWQ8 316 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 OR10A5Q9H207 317 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 OXSMQ9NWU1 459 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 MKS1Q9NXB0 559 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 SH3BGRL2Q9UJC5 107 aa21.59■■□□□ 1.05
C9orf3-215ENST00000478473 NUDT17P0C025 328 aa21.58■■□□□ 1.05
C9orf3-215ENST00000478473 ESRRAP11474 423 aaPredicted RBP21.58■■□□□ 1.05
C9orf3-215ENST00000478473 KRT15P19012 456 aa21.58■■□□□ 1.05
C9orf3-215ENST00000478473 GSTM5P46439 218 aa21.58■■□□□ 1.05
C9orf3-215ENST00000478473 SMSP52788 366 aa21.58■■□□□ 1.05
C9orf3-215ENST00000478473 CEBPEQ15744 281 aa21.58■■□□□ 1.05
C9orf3-215ENST00000478473 FRMD7Q6ZUT3 714 aa21.58■■□□□ 1.05
C9orf3-215ENST00000478473 FAM47EQ6ZV65 393 aa21.58■■□□□ 1.05
C9orf3-215ENST00000478473 TAGAPQ8N103 731 aa21.58■■□□□ 1.05
C9orf3-215ENST00000478473 MMP21Q8N119 569 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms