RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 GCNT2Q8N0V5 402 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 PDIK1LQ8N165 341 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 RNF175Q8N4F7 328 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 C9orf106Q8NAJ2 232 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 BBOF1Q8ND07 529 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 SIMC1Q8NDZ2 872 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 C7orf57Q8NEG2 295 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 OR1J4Q8NGS1 313 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 OR14L1PQ8NHC6 308 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 ANKRD49Q8WVL7 239 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 RIT1Q92963 219 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 ABTB1Q969K4 478 aaPredicted RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 INTS12Q96CB8 462 aaKnown RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 PIK3IP1Q96FE7 263 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 FAM111AQ96PZ2 611 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 CENPKQ9BS16 269 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 BDH2Q9BUT1 245 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 MS4A8Q9BY19 250 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 PITHD1Q9GZP4 211 aaPredicted RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 PRDM14Q9GZV8 571 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 OR51B5Q9H339 312 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 NT5DC2Q9H857 520 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 METTL7AQ9H8H3 244 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 CAB39LQ9H9S4 337 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 PROK2Q9HC23 129 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 SH2D2AQ9NP31 389 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 KLRF1Q9NZS2 232 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 NDRG3Q9UGV2 375 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 PHF11Q9UIL8 331 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 CNOT11Q9UKZ1 510 aaKnown RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 ZNF490Q9ULM2 529 aaPredicted RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 RNF112Q9ULX5 631 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 MAPRE3Q9UPY8 281 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 C15orf41Q9Y2V0 281 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 PSAT1Q9Y617 370 aa6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 FN1P02751 2386 aaKnown RBP6.11□□□□□ -1.43
RTFDC1-206ENST00000477485 A0A1W2PPR1 153 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 MBD3L4A6NDZ8 208 aaPredicted RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 MBD3L3A6NE82 208 aaPredicted RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 MBD3L5A6NJ08 208 aaPredicted RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 CD8B2A6NJW9 211 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 SUPT3HB4E1H0 165 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 SNPHO15079 494 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 PHGDHO43175 533 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 TRIM3O75382 744 aaPredicted RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 SUPT3HO75486 399 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 PIAS1O75925 651 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 SNX4O95219 450 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 GOSR1O95249 250 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 IGKV3-11P04433 115 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 HPNP05981 417 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 CCDC166P0CW27 439 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 CD22P20273 847 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 CDC25BP30305 580 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 SSTR4P31391 388 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 KCNJ5P48544 419 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 FNTAP49354 379 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 DIO3P55073 304 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 SLC37A1P57057 533 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 RPS13P62277 151 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 PHEXP78562 749 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 PCDH1Q08174 1060 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 MGAT5Q09328 741 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 EBPQ15125 230 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 NTRK2Q16620 822 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 TMEM35AQ53FP2 167 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 KHDRBS2Q5VWX1 349 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 VASNQ6EMK4 673 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 OR4C11Q6IEV9 310 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 SULT1C3Q6IMI6 304 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 MED27Q6P2C8 311 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 LYPD8Q6UX82 237 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 CXXC5Q7LFL8 322 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 P4HA3Q7Z4N8 544 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 UBE3DQ7Z6J8 389 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 ZC3HC1Q86WB0 502 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 GRAMD2AQ8IUY3 354 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 ST13P4Q8IZP2 240 aaPredicted RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 CNEP1R1Q8N9A8 125 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 FAM83FQ8NEG4 500 aaPredicted RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 MBD3L2Q8NHZ7 208 aaPredicted RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 ZNF473Q8WTR7 871 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 SLC44A1Q8WWI5 657 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 ANKRD7Q92527 254 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 TANKQ92844 425 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 PIGTQ969N2 578 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 UBE2E3Q969T4 207 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 ISL2Q96A47 359 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 RGMAQ96B86 450 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 CMTM7Q96FZ5 175 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 ZC3HAV1LQ96H79 300 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 WDYHV1Q96HA8 205 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 PBKQ96KB5 322 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 COX4I2Q96KJ9 171 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 DACH2Q96NX9 599 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 MTERF1Q99551 399 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 TM9SF2Q99805 663 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 TUBA1CQ9BQE3 449 aa6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 PELOQ9BRX2 385 aaKnown RBP6.1□□□□□ -1.43
RTFDC1-206ENST00000477485 MED18Q9BUE0 208 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms