RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 HK2P52789 917 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 ABCE1P61221 599 aaKnown RBP13.41□□□□□ -0.26
ABCF3-211ENST00000475728 C2orf80Q0P641 193 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 STX3Q13277 289 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 MPP2Q14168 576 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 IGFBP7Q16270 282 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 MPEG1Q2M385 716 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 UGT3A2Q3SY77 523 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 SLC25A25Q6KCM7 469 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 TRIM42Q8IWZ5 723 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 CYP4Z2PQ8N1L4 340 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 SLC15A4Q8N697 577 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 CDC26Q8NHZ8 85 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 SLC22A8Q8TCC7 542 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 AGR3Q8TD06 166 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 UCN3Q969E3 161 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 PAIP2Q9BPZ3 127 aaKnown RBP13.41□□□□□ -0.26
ABCF3-211ENST00000475728 TUBB1Q9H4B7 451 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 VIPAS39Q9H9C1 493 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 ASF1BQ9NVP2 202 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 ANKRD10Q9NXR5 420 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 ERVK-11Q9UQG0 969 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 KLF13Q9Y2Y9 288 aaPredicted RBP13.41□□□□□ -0.26
ABCF3-211ENST00000475728 RAP2CQ9Y3L5 183 aa13.41□□□□□ -0.26
ABCF3-211ENST00000475728 POLR3HQ9Y535 204 aaPredicted RBP13.41□□□□□ -0.26
ABCF3-211ENST00000475728 A8MVJ9 347 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 WWP2O00308 870 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 PRKNO60260 465 aaPredicted RBP13.4□□□□□ -0.26
ABCF3-211ENST00000475728 BCAS2O75934 225 aaPredicted RBP13.4□□□□□ -0.26
ABCF3-211ENST00000475728 OR2J2O76002 312 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 NEURL1O76050 574 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 MPIP34949 423 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 FEN1P39748 380 aaKnown RBP13.4□□□□□ -0.26
ABCF3-211ENST00000475728 ASMTP46597 345 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 SLC1A6P48664 564 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 SLC37A1P57057 533 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 FUT7Q11130 342 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 MAP4K2Q12851 820 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 ELOAQ14241 798 aaKnown RBP13.4□□□□□ -0.26
ABCF3-211ENST00000475728 KIAA0040Q15053 153 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 ATP6AP1LQ52LC2 224 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 PRR30Q53SZ7 412 aaPredicted RBP13.4□□□□□ -0.26
ABCF3-211ENST00000475728 HLA-DQA1Q5Y7H0 255 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 SPINK14Q6IE38 97 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 FAM71E1Q6IPT2 247 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 DGAT2L6Q6ZPD8 337 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 Q6ZSR9 355 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 DND1Q8IYX4 353 aaKnown RBP13.4□□□□□ -0.26
ABCF3-211ENST00000475728 VWA5B2Q8N398 1253 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 ZNF321PQ8N8H1 164 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 RAB3IL1Q8TBN0 382 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 GRHL3Q8TE85 626 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 FAR1Q8WVX9 515 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 ZBTB9Q96C00 473 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 ERP27Q96DN0 273 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 SCMH1Q96GD3 660 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 SGCZQ96LD1 299 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 SIGLEC12Q96PQ1 595 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 BBS4Q96RK4 519 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 RASL10BQ96S79 203 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 BARD1Q99728 777 aaKnown RBP13.4□□□□□ -0.26
ABCF3-211ENST00000475728 TIMMDC1Q9NPL8 285 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 SLC35C2Q9NQQ7 365 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 HPF1Q9NWY4 346 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 TAS2R7Q9NYW3 318 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 HEY2Q9UBP5 337 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 ZDHHC2Q9UIJ5 367 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 NBASA2RRP1 2371 aa13.4□□□□□ -0.26
ABCF3-211ENST00000475728 TMEM200CA6NKL6 621 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 TMEM233B4DJY2 109 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 LSM1O15116 133 aaKnown RBP13.39□□□□□ -0.27
ABCF3-211ENST00000475728 SLITRK5O94991 958 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 H2AFXP16104 143 aaPredicted RBP13.39□□□□□ -0.27
ABCF3-211ENST00000475728 BGNP21810 368 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 NTSP30990 170 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 RPL38P63173 70 aaKnown RBP13.39□□□□□ -0.27
ABCF3-211ENST00000475728 MAPKAPK3Q16644 382 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 GALNTL6Q49A17 601 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 XKR7Q5GH72 579 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 PIGGQ5H8A4 983 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 ZNF468Q5VIY5 522 aaPredicted RBP13.39□□□□□ -0.27
ABCF3-211ENST00000475728 ATG16L1Q676U5 607 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 C9orf40Q8IXQ3 194 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 TAGAPQ8N103 731 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 MMP21Q8N119 569 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 POGLUT1Q8NBL1 392 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 OR2T11Q8NH01 316 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.39□□□□□ -0.27
ABCF3-211ENST00000475728 ZNF675Q8TD23 568 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 TP53INP1Q96A56 240 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 EXOSC8Q96B26 276 aaKnown RBP13.39□□□□□ -0.27
ABCF3-211ENST00000475728 C19orf60Q96EN9 201 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 CNRIP1Q96F85 164 aaPredicted RBP13.39□□□□□ -0.27
ABCF3-211ENST00000475728 ZNF764Q96H86 408 aaPredicted RBP13.39□□□□□ -0.27
ABCF3-211ENST00000475728 FCRL1Q96LA6 429 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 ZNF681Q96N22 645 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 GAL3ST4Q96RP7 486 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 BRINP2Q9C0B6 783 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 WWTR1Q9GZV5 400 aa13.39□□□□□ -0.27
ABCF3-211ENST00000475728 OR10A5Q9H207 317 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms