RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 ZNF764Q96H86 408 aaPredicted RBP16.88■□□□□ 0.29
SNRPB-203ENST00000474384 FBXL20Q96IG2 436 aa16.88■□□□□ 0.29
SNRPB-203ENST00000474384 MARK4Q96L34 752 aa16.88■□□□□ 0.29
SNRPB-203ENST00000474384 AGAP4Q96P64 663 aa16.88■□□□□ 0.29
SNRPB-203ENST00000474384 DEFB126Q9BYW3 111 aa16.88■□□□□ 0.29
SNRPB-203ENST00000474384 DPY30Q9C005 99 aa16.88■□□□□ 0.29
SNRPB-203ENST00000474384 BRINP2Q9C0B6 783 aa16.88■□□□□ 0.29
SNRPB-203ENST00000474384 ADNPQ9H2P0 1102 aa16.88■□□□□ 0.29
SNRPB-203ENST00000474384 COPS7AQ9UBW8 275 aa16.88■□□□□ 0.29
SNRPB-203ENST00000474384 ERVK-19Q9WJR5 959 aa16.88■□□□□ 0.29
SNRPB-203ENST00000474384 PCDHGA9Q9Y5G4 932 aaKnown RBP16.88■□□□□ 0.29
SNRPB-203ENST00000474384 GPR45Q9Y5Y3 372 aa16.88■□□□□ 0.29
SNRPB-203ENST00000474384 IGSF10Q6WRI0 2623 aa16.88■□□□□ 0.29
SNRPB-203ENST00000474384 BOD1L1Q8NFC6 3051 aa16.88■□□□□ 0.29
SNRPB-203ENST00000474384 ANKRD28O15084 1053 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 UBDO15205 165 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 PDPK1O15530 556 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 IGKV3-11P04433 115 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 LAMP1P11279 417 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 NTSP30990 170 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 NCBP2P52298 156 aaKnown RBP eCLIP16.87■□□□□ 0.292e-11■■■□□ 16.9
SNRPB-203ENST00000474384 MAP4K2Q12851 820 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 SF3A3Q12874 501 aaKnown RBP eCLIP16.87■□□□□ 0.296e-7■■■□□ 19.2
SNRPB-203ENST00000474384 LY6DQ14210 128 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 RPS6KA2Q15349 733 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 CPTPQ5TA50 214 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 C6orf163Q5TEZ5 329 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 CGB2Q6NT52 195 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 H3F3CQ6NXT2 135 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 LINC00696Q6ZRV3 163 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 THAP3Q8WTV1 239 aaPredicted RBP16.87■□□□□ 0.29
SNRPB-203ENST00000474384 ART5Q96L15 291 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 AMDHD1Q96NU7 426 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 ZNF317Q96PQ6 595 aaPredicted RBP16.87■□□□□ 0.29
SNRPB-203ENST00000474384 PRPF18Q99633 342 aaKnown RBP16.87■□□□□ 0.29
SNRPB-203ENST00000474384 CCDC28BQ9BUN5 200 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 SEMA4CQ9C0C4 833 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 GLIPR2Q9H4G4 154 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 SLAMF7Q9NQ25 335 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 MAT2BQ9NZL9 334 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 TUBD1Q9UJT1 453 aa16.87■□□□□ 0.29
SNRPB-203ENST00000474384 A0A0G2JND7 137 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 E9PBE3 544 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 PRKNO60260 465 aaPredicted RBP16.86■□□□□ 0.29
SNRPB-203ENST00000474384 KLHL41O60662 606 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 ZFAND5O76080 213 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 PDGFAP04085 211 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 CLPSP04118 112 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 TROVE2P10155 538 aaKnown RBP eCLIP16.86■□□□□ 0.291e-323■□□□□ 9.3
SNRPB-203ENST00000474384 IDO1P14902 403 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 EFNA1P20827 205 aaPredicted RBP16.86■□□□□ 0.29
SNRPB-203ENST00000474384 S1PR1P21453 382 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 SSTR4P31391 388 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 SOX18P35713 384 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 C21orf58P58505 322 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 UFM1P61960 85 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 MRPS35P82673 323 aaKnown RBP16.86■□□□□ 0.29
SNRPB-203ENST00000474384 FUT7Q11130 342 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 PGS1Q32NB8 556 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 TRMT12Q53H54 448 aaKnown RBP16.86■□□□□ 0.29
SNRPB-203ENST00000474384 ZNF628Q5EBL2 1059 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 CRB2Q5IJ48 1285 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 HSDL2Q6YN16 418 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 ZNF551Q7Z340 670 aaPredicted RBP16.86■□□□□ 0.29
SNRPB-203ENST00000474384 C9orf43Q8TAL5 461 aaPredicted RBP16.86■□□□□ 0.29
SNRPB-203ENST00000474384 KAT2AQ92830 837 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 COQ8BQ96D53 544 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 TEX37Q96LM6 180 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 UBL7Q96S82 380 aaPredicted RBP16.86■□□□□ 0.29
SNRPB-203ENST00000474384 SMAD5Q99717 465 aaKnown RBP16.86■□□□□ 0.29
SNRPB-203ENST00000474384 NPAS2Q99743 824 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 SIKE1Q9BRV8 207 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 CDCP1Q9H5V8 836 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 ZBTB20Q9HC78 741 aaPredicted RBP16.86■□□□□ 0.29
SNRPB-203ENST00000474384 ZNF71Q9NQZ8 489 aaPredicted RBP16.86■□□□□ 0.29
SNRPB-203ENST00000474384 FAM53CQ9NYF3 392 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 MAPRE3Q9UPY8 281 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 TP53TG5Q9Y2B4 290 aa16.86■□□□□ 0.29
SNRPB-203ENST00000474384 TNRC6AQ8NDV7 1962 aaKnown RBP16.86■□□□□ 0.29
SNRPB-203ENST00000474384 MAN1A2O60476 641 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 ALPPP05187 535 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 PCSK2P16519 638 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 DDX5P17844 614 aaKnown RBP16.85■□□□□ 0.29
SNRPB-203ENST00000474384 SOX11P35716 441 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 SLC37A1P57057 533 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 RNF4P78317 190 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 EXOSC7Q15024 291 aaKnown RBP16.85■□□□□ 0.29
SNRPB-203ENST00000474384 GSTA3Q16772 222 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 ACER2Q5QJU3 275 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 TCTN3Q6NUS6 607 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 ISLR2Q6UXK2 745 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 RNF111Q6ZNA4 994 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 RPS19BP1Q86WX3 136 aaKnown RBP16.85■□□□□ 0.29
SNRPB-203ENST00000474384 VWA5B2Q8N398 1253 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 SLC5A8Q8N695 610 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 SIMC1Q8NDZ2 872 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 CTHRC1Q96CG8 243 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 WBP1Q96G27 269 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 RILPQ96NA2 401 aa16.85■□□□□ 0.29
SNRPB-203ENST00000474384 ANKRA2Q9H9E1 313 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms