RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 HMGCLP35914 325 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 NSFP46459 744 aaKnown RBP4.3□□□□□ -1.72
CLK1-209ENST00000472679 GSTO1P78417 241 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 SLC22A6Q4U2R8 563 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 GPAT3Q53EU6 434 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 NKAIN2Q5VXU1 208 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 RNLSQ5VYX0 342 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 LIPJQ5W064 366 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 TOM1L2Q6ZVM7 507 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 GPR142Q7Z601 462 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 FBXL16Q8N461 479 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 SPC24Q8NBT2 197 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 RHOXF1Q8NHV9 184 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 PSMA8Q8TAA3 256 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 DTD2Q96FN9 168 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 TMEM245Q9H330 911 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 ADGRL4Q9HBW9 690 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 COMMD8Q9NX08 183 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 CYP39A1Q9NYL5 469 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 MTRRQ9UBK8 725 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 NARFQ9UHQ1 456 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 IKZF3Q9UKT9 509 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 SLC6A5Q9Y345 797 aa4.3□□□□□ -1.72
CLK1-209ENST00000472679 MRPS2Q9Y399 296 aaKnown RBP4.3□□□□□ -1.72
CLK1-209ENST00000472679 DHX29Q7Z478 1369 aaKnown RBP4.29□□□□□ -1.72
CLK1-209ENST00000472679 TRIM49BA6NDI0 452 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 LRRTM2O43300 516 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 KBTBD11O94819 623 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 OAS1P00973 400 aaKnown RBP4.29□□□□□ -1.72
CLK1-209ENST00000472679 AREGP15514 252 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 TNFRSF4P43489 277 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 ACADSBP45954 432 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 CNN1P51911 297 aaKnown RBP4.29□□□□□ -1.72
CLK1-209ENST00000472679 IST1P53990 364 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 PEX6Q13608 980 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 CRMP1Q14194 572 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 LTB4RQ15722 352 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 C2orf76Q3KRA6 126 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 C14orf28Q4W4Y0 310 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 FAM219BQ5XKK7 198 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 NAXDQ8IW45 347 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 FAM9BQ8IZU0 186 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 ZPLD1Q8TCW7 415 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 P3H4Q92791 437 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 SLCO4A1Q96BD0 722 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 ZNF560Q96MR9 790 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 MCCC1Q96RQ3 725 aaPredicted RBP4.29□□□□□ -1.72
CLK1-209ENST00000472679 APOL2Q9BQE5 337 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 TTYH2Q9BSA4 534 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 ABCG4Q9H172 646 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 TNMDQ9H2S6 317 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 DCTPP1Q9H773 170 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 ELL3Q9HB65 397 aaPredicted RBP4.29□□□□□ -1.72
CLK1-209ENST00000472679 PRR34Q9NV39 138 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 NDUFA13Q9P0J0 144 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 SEC14L4Q9UDX3 406 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 MLXQ9UH92 298 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 RNF24Q9Y225 148 aa4.29□□□□□ -1.72
CLK1-209ENST00000472679 NPC1L1Q9UHC9 1359 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 FAM205AQ6ZU69 1335 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 ZNF487B1APH4 448 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 EEF2KO00418 725 aaKnown RBP4.28□□□□□ -1.72
CLK1-209ENST00000472679 OLFM2O95897 454 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 PIGRP01833 764 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 ATP6V1B1P15313 513 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 CALML3P27482 149 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 PPP2R1BP30154 601 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 BRCC3P46736 316 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 SLC12A3P55017 1021 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 GFPT1Q06210 699 aaPredicted RBP4.28□□□□□ -1.72
CLK1-209ENST00000472679 Q1RN00 199 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 SLC10A5Q5PT55 438 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 TCHHL1Q5QJ38 904 aaPredicted RBP4.28□□□□□ -1.72
CLK1-209ENST00000472679 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
CLK1-209ENST00000472679 ABRAXAS1Q6UWZ7 409 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 CCBE1Q6UXH8 406 aaPredicted RBP4.28□□□□□ -1.72
CLK1-209ENST00000472679 SLC22A16Q86VW1 577 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 BEST4Q8NFU0 473 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 CCDC43Q96MW1 224 aaKnown RBP4.28□□□□□ -1.72
CLK1-209ENST00000472679 ZBP1Q9H171 429 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 PNNQ9H307 717 aaKnown RBP4.28□□□□□ -1.72
CLK1-209ENST00000472679 RNF41Q9H4P4 317 aaPredicted RBP4.28□□□□□ -1.72
CLK1-209ENST00000472679 VPS54Q9P1Q0 977 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 KLHDC2Q9Y2U9 406 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 ATG4BQ9Y4P1 393 aa4.28□□□□□ -1.72
CLK1-209ENST00000472679 AFF2P51816 1311 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 IGLV3-10A0A075B6K4 115 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 MACROD2A1Z1Q3 448 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 KERAO60938 352 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 LRP3O75074 770 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 PNPP00491 289 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 THY1P04216 161 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 SERPINF2P08697 491 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 P4HA1P13674 534 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 HSD17B1P14061 328 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 UCP1P25874 307 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 ZNF131P52739 623 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 NDST1P52848 882 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 HMGCS2P54868 508 aa4.27□□□□□ -1.73
CLK1-209ENST00000472679 CDKL1Q00532 357 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms