RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 RIT1Q92963 219 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 ADIPOR1Q96A54 375 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 NTNG2Q96CW9 530 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 SPACA9Q96E40 222 aaPredicted RBP7.42□□□□□ -1.22
USP48-207ENST00000471752 RBM18Q96H35 190 aaKnown RBP7.42□□□□□ -1.22
USP48-207ENST00000471752 FBXL20Q96IG2 436 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 JSRP1Q96MG2 331 aaPredicted RBP7.42□□□□□ -1.22
USP48-207ENST00000471752 GNRHR2Q96P88 292 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 WWTR1Q9GZV5 400 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 TP63Q9H3D4 680 aaPredicted RBP7.42□□□□□ -1.22
USP48-207ENST00000471752 ACSS3Q9H6R3 686 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 CXorf21Q9HAI6 301 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 IL1RL2Q9HB29 575 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 EHD3Q9NZN3 535 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 HEY2Q9UBP5 337 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 ACAD8Q9UKU7 415 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 SLC6A5Q9Y345 797 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 ANGPTL3Q9Y5C1 460 aa7.42□□□□□ -1.22
USP48-207ENST00000471752 ABCA4P78363 2273 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 KIAA1549Q9HCM3 1950 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 TRIM49D1C9J1S8 452 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 POC1B-GALNT4F8VUJ3 575 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 CDK2AP1O14519 115 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 TRIM3O75382 744 aaPredicted RBP7.41□□□□□ -1.22
USP48-207ENST00000471752 URI1O94763 535 aaPredicted RBP7.41□□□□□ -1.22
USP48-207ENST00000471752 CLDN9O95484 217 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 MLYCDO95822 493 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 PDYNP01213 254 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 P04436 131 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 FAM153BP0C7A2 387 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 SLC35E2P0CK97 266 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 MSX1P28360 303 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 FEN1P39748 380 aaKnown RBP7.41□□□□□ -1.22
USP48-207ENST00000471752 HTR6P50406 440 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 GALNT1Q10472 559 aaPredicted RBP7.41□□□□□ -1.22
USP48-207ENST00000471752 TBL3Q12788 808 aaKnown RBP7.41□□□□□ -1.22
USP48-207ENST00000471752 LTB4RQ15722 352 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 HYAL4Q2M3T9 481 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 FAM153CQ494X1 144 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 TRMT12Q53H54 448 aaKnown RBP7.41□□□□□ -1.22
USP48-207ENST00000471752 EIPR1Q53HC9 387 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 UNC50Q53HI1 259 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 OPN5Q6U736 354 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 SCIMPQ6UWF3 145 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 SLC22A16Q86VW1 577 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 DMRTC2Q8IXT2 367 aaPredicted RBP7.41□□□□□ -1.22
USP48-207ENST00000471752 ST13P4Q8IZP2 240 aaPredicted RBP7.41□□□□□ -1.22
USP48-207ENST00000471752 FAM109AQ8N4B1 249 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 SRFBP1Q8NEF9 429 aaKnown RBP7.41□□□□□ -1.22
USP48-207ENST00000471752 TNIP2Q8NFZ5 429 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 OR4F6Q8NGB9 312 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 OR5L2Q8NGL0 311 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 NUBPLQ8TB37 319 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 TRPC4APQ8TEL6 797 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 RND1Q92730 232 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 UBE2E3Q969T4 207 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 ISL2Q96A47 359 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 TM4SF18Q96CE8 201 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 SGCZQ96LD1 299 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 C16orf45Q96MC5 204 aaPredicted RBP7.41□□□□□ -1.22
USP48-207ENST00000471752 PAFAH2Q99487 392 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 FUT8Q9BYC5 575 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 ROGDIQ9GZN7 287 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 RAB17Q9H0T7 212 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 NXF5Q9H1B4 397 aaKnown RBP7.41□□□□□ -1.22
USP48-207ENST00000471752 C12orf65Q9H3J6 166 aaKnown RBP7.41□□□□□ -1.22
USP48-207ENST00000471752 ZNF703Q9H7S9 590 aaPredicted RBP7.41□□□□□ -1.22
USP48-207ENST00000471752 MCCC2Q9HCC0 563 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 TNFRSF12AQ9NP84 129 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 ZFP64Q9NPA5 681 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 XPR1Q9UBH6 696 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 TSC22D4Q9Y3Q8 395 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 PCDHGA11Q9Y5H2 935 aa7.41□□□□□ -1.22
USP48-207ENST00000471752 ANK3Q12955 4377 aaKnown RBP7.41□□□□□ -1.22
USP48-207ENST00000471752 FREM3P0C091 2139 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 IQANK1A0A1B0GTG1 560 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 C2orf92A0A1B0GVN3 265 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 A8MT66 165 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 FOXE1O00358 373 aaPredicted RBP7.4□□□□□ -1.22
USP48-207ENST00000471752 AQP7O14520 342 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 OR10H2O60403 315 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 DLX3O60479 287 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 OR4F21O95013 312 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 CBX7O95931 251 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 HOXD4P09016 255 aaPredicted RBP7.4□□□□□ -1.22
USP48-207ENST00000471752 NR2F6P10588 404 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 CPMP14384 443 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 SSTR2P30874 369 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 CHRNB4P30926 498 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 PTGDSP41222 190 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 SLCO1A2P46721 670 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 MAN2A2P49641 1150 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 SERPINB8P50452 374 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 CCNG1P51959 295 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 KCNJ2P63252 427 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 RAE1P78406 368 aaKnown RBP7.4□□□□□ -1.22
USP48-207ENST00000471752 MRPS35P82673 323 aaKnown RBP7.4□□□□□ -1.22
USP48-207ENST00000471752 FUT7Q11130 342 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 NAB1Q13506 487 aa7.4□□□□□ -1.22
USP48-207ENST00000471752 CUL3Q13618 768 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms