RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SMIM28A0A1B0GU29 152 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 A0A1W2PR80 420 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 SMIM18P0DKX4 95 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 CXCL8P10145 99 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 LHCGRP22888 699 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 PTPN3P26045 913 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 DEKP35659 375 aaKnown RBP4.55□□□□□ -1.68
CCDC39-202ENST00000471307 MTHFRP42898 656 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 MFAP3P55082 362 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 CCL23P55773 120 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 RBP5P82980 135 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 TFAMQ00059 246 aaKnown RBP4.55□□□□□ -1.68
CCDC39-202ENST00000471307 GCNT1Q02742 428 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 LY6DQ14210 128 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 SMC1AQ14683 1233 aaKnown RBP4.55□□□□□ -1.68
CCDC39-202ENST00000471307 TMEM132DQ14C87 1099 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 SNAPC1Q16533 368 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 PHKG1Q16816 387 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 TTC31Q49AM3 519 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-202ENST00000471307 EPC2Q52LR7 807 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 KRT80Q6KB66 452 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 ZNF774Q6NX45 483 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 FAM198BQ6UWH4 519 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 ECHDC2Q86YB7 292 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 ZNF595Q8IYB9 648 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 OR8H3Q8N146 312 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 TMCO5AQ8N6Q1 288 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 THAP8Q8NA92 274 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 SPC24Q8NBT2 197 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 APPL2Q8NEU8 664 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 TSPAN14Q8NG11 270 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 OR8K1Q8NGG5 319 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 RASL10AQ92737 203 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 SYN2Q92777 582 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-202ENST00000471307 CENPTQ96BT3 561 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 PANX2Q96RD6 677 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 GAL3ST4Q96RP7 486 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 CRACR2AQ9BSW2 395 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 NXF3Q9H4D5 531 aaKnown RBP4.55□□□□□ -1.68
CCDC39-202ENST00000471307 FAM124BQ9H5Z6 455 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-202ENST00000471307 TMEM161AQ9NX61 479 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 GCNT4Q9P109 453 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 CRNNQ9UBG3 495 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-202ENST00000471307 MUTYHQ9UIF7 546 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 GTF3C4Q9UKN8 822 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 ITGA11Q9UKX5 1188 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 UBQLN1Q9UMX0 589 aaKnown RBP4.55□□□□□ -1.68
CCDC39-202ENST00000471307 HES2Q9Y543 173 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 CSNK1G3Q9Y6M4 447 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 ANK1P16157 1881 aa4.55□□□□□ -1.68
CCDC39-202ENST00000471307 UMODL1Q5DID0 1318 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 A0A1W2PPR1 153 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 NEMP2A6NFY4 417 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 ARL5CA6NH57 179 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 ARPC2O15144 300 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 NOL4O94818 638 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 TRUB2O95900 331 aaKnown RBP4.54□□□□□ -1.68
CCDC39-202ENST00000471307 ASS1P00966 412 aaKnown RBP4.54□□□□□ -1.68
CCDC39-202ENST00000471307 HLA-DRAP01903 254 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 GYPCP04921 128 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 LINGO3P0C6S8 592 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 CCDC172P0C7W6 258 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 P4HA1P13674 534 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 UCHL3P15374 230 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 JAK1P23458 1154 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 HNRNPH3P31942 346 aaKnown RBP4.54□□□□□ -1.68
CCDC39-202ENST00000471307 CASP14P31944 242 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 RPL9P32969 192 aaKnown RBP4.54□□□□□ -1.68
CCDC39-202ENST00000471307 CAPZA2P47755 286 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 KLK7P49862 253 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 POLR2FP61218 127 aaKnown RBP4.54□□□□□ -1.68
CCDC39-202ENST00000471307 CSNK2BP67870 215 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 ZNF74Q16587 644 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 MFSD12Q6NUT3 480 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 FRRS1Q6ZNA5 592 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 RAPH1Q70E73 1250 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 CCDC186Q7Z3E2 898 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 ARHGAP22Q7Z5H3 698 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 DEFB128Q7Z7B8 93 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 SLFN11Q7Z7L1 901 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 LINC00346Q8IVM7 164 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 LRRC8AQ8IWT6 810 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 UNC45BQ8IWX7 931 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 EFCAB13Q8IY85 973 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 LRRC52Q8N7C0 313 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 TC2NQ8N9U0 490 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 Q8NBF4 154 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 CCDC112Q8NEF3 446 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 OR5B17Q8NGF7 314 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 TMCO6Q96DC7 493 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 TRIM44Q96DX7 344 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-202ENST00000471307 ZNF486Q96H40 463 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-202ENST00000471307 NECTIN4Q96NY8 510 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 RAB3IPQ96QF0 476 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-202ENST00000471307 SPAG5Q96R06 1193 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 APOL6Q9BWW8 343 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 GANQ9H2C0 597 aa4.54□□□□□ -1.68
CCDC39-202ENST00000471307 UBE2TQ9NPD8 197 aaPredicted RBP4.54□□□□□ -1.68
CCDC39-202ENST00000471307 ZNHIT6Q9NWK9 470 aaKnown RBP4.54□□□□□ -1.68
CCDC39-202ENST00000471307 AIPL1Q9NZN9 384 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms