RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 TICAM1Q8IUC6 712 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 C9orf40Q8IXQ3 194 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 CATSPER1Q8NEC5 780 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 OR8K3Q8NH51 312 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 CLHC1Q8NHS4 586 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 ZNF75CPQ92670 426 aaPredicted RBP18.35■□□□□ 0.53
HDAC7-220ENST00000471235 NUF2Q9BZD4 464 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 SLC35C2Q9NQQ7 365 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 MAT2BQ9NZL9 334 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 ENTPD4Q9Y227 616 aa18.35■□□□□ 0.53
HDAC7-220ENST00000471235 SPENQ96T58 3664 aaKnown RBP18.35■□□□□ 0.53
HDAC7-220ENST00000471235 FCHO1O14526 889 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 SLC28A2O43868 658 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 MAPK1P28482 360 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 SSTR4P31391 388 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 SLC37A1P57057 533 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 TUBA3CQ13748 450 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 ZNF169Q14929 603 aaPredicted RBP18.34■□□□□ 0.53
HDAC7-220ENST00000471235 TLR1Q15399 786 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 CEBPEQ15744 281 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 PRICKLE4Q2TBC4 344 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 C6orf163Q5TEZ5 329 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 TUBA3EQ6PEY2 450 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 RNF111Q6ZNA4 994 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 C16orf47Q6ZP98 133 aaPredicted RBP18.34■□□□□ 0.53
HDAC7-220ENST00000471235 LIX1Q8N485 282 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 FNDC5Q8NAU1 212 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 GFM2Q969S9 779 aaKnown RBP18.34■□□□□ 0.53
HDAC7-220ENST00000471235 BRINP2Q9C0B6 783 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 LIN28AQ9H9Z2 209 aaKnown RBP18.34■□□□□ 0.53
HDAC7-220ENST00000471235 GIMAP4Q9NUV9 329 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.34■□□□□ 0.53
HDAC7-220ENST00000471235 ANKRD10Q9NXR5 420 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 MARCOQ9UEW3 520 aaPredicted RBP18.34■□□□□ 0.53
HDAC7-220ENST00000471235 BAIAP2L1Q9UHR4 511 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 PCDHGA10Q9Y5H3 936 aa18.34■□□□□ 0.53
HDAC7-220ENST00000471235 AKAP10O43572 662 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 ITGA10O75578 1167 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 LRATO95237 230 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 SOX18P35713 384 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 ASMTP46597 345 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 MGAT2Q10469 447 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 FUT7Q11130 342 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 ZNF468Q5VIY5 522 aaPredicted RBP18.33■□□□□ 0.52
HDAC7-220ENST00000471235 FAM111BQ6SJ93 734 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 SAMD14Q8IZD0 417 aaPredicted RBP18.33■□□□□ 0.52
HDAC7-220ENST00000471235 VWA5B2Q8N398 1253 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 MDS2Q8NDY4 140 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 ADCY4Q8NFM4 1077 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 SUN3Q8TAQ9 357 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 ZNF764Q96H86 408 aaPredicted RBP18.33■□□□□ 0.52
HDAC7-220ENST00000471235 UTP23Q9BRU9 249 aaKnown RBP18.33■□□□□ 0.52
HDAC7-220ENST00000471235 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.33■□□□□ 0.52
HDAC7-220ENST00000471235 AKTIPQ9H8T0 292 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 MEAF6Q9HAF1 191 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 SLAMF7Q9NQ25 335 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 MYOTQ9UBF9 498 aa18.33■□□□□ 0.52
HDAC7-220ENST00000471235 ZNF462Q96JM2 2506 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 TRAV17A0A0B4J275 112 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 MYO1GB0I1T2 1018 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 WWP2O00308 870 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 SDHDO14521 159 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 KITP10721 976 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 TRHRP34981 398 aaPredicted RBP18.32■□□□□ 0.52
HDAC7-220ENST00000471235 CD96P40200 585 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 MAP4K2Q12851 820 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 PDE7AQ13946 482 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 EBPQ15125 230 aaKnown RBP18.32■□□□□ 0.52
HDAC7-220ENST00000471235 PRR30Q53SZ7 412 aaPredicted RBP18.32■□□□□ 0.52
HDAC7-220ENST00000471235 ZNF628Q5EBL2 1059 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 IL23RQ5VWK5 629 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 ANKRD26P1Q6NSI1 321 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 CCDC116Q8IYX3 515 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 FAM9CQ8IZT9 166 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 ZNF615Q8N8J6 731 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 OR9A2Q8NGT5 310 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 NUBPLQ8TB37 319 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 ZNF675Q8TD23 568 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 LRRC8CQ8TDW0 803 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 DYDC1Q8WWB3 177 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 CTHRC1Q96CG8 243 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 SIGLEC12Q96PQ1 595 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 REEP4Q9H6H4 257 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 INTS9Q9NV88 658 aaKnown RBP18.32■□□□□ 0.52
HDAC7-220ENST00000471235 ASIC5Q9NY37 505 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 TAS2R7Q9NYW3 318 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 ZNF639Q9UID6 485 aa18.32■□□□□ 0.52
HDAC7-220ENST00000471235 NUP214P35658 2090 aaPredicted RBP18.32■□□□□ 0.52
HDAC7-220ENST00000471235 OR6C76A6NM76 312 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 TBX19O60806 448 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 OR2J2O76002 312 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 PRPS2P11908 318 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 PCSK2P16519 638 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 S1PR1P21453 382 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 NTSP30990 170 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 MRPS35P82673 323 aaKnown RBP18.31■□□□□ 0.52
HDAC7-220ENST00000471235 OC90Q02509 493 aaPredicted RBP18.31■□□□□ 0.52
HDAC7-220ENST00000471235 EMX2Q04743 252 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 DUSP8Q13202 625 aa18.31■□□□□ 0.52
HDAC7-220ENST00000471235 MAD2L1Q13257 205 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms