RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 TRBV2A0A0J9YWF9 115 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 TMEM120BA0PK00 339 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 ZNF197O14709 1029 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 SLC22A2O15244 555 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 CDK2AP2O75956 126 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 TTC4O95801 387 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 PAK4O96013 591 aaPredicted RBP4.86□□□□□ -1.63
RBM39-227ENST00000470563 IL1BP01584 269 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 RAF1P04049 648 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 NR3C1P04150 777 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 YES1P07947 543 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 RPSAP08865 295 aaKnown RBP4.86□□□□□ -1.63
RBM39-227ENST00000470563 SNHG28P0DPA3 235 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 CETPP11597 493 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 KRT13P13646 458 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 TYMPP19971 482 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 ITGA3P26006 1051 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 ATP6V1E1P36543 226 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 VHLP40337 213 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 PLTPP55058 493 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 DYNLL1P63167 89 aaKnown RBP4.86□□□□□ -1.63
RBM39-227ENST00000470563 MECOMQ03112 1051 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 CBX3Q13185 183 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 GPR17Q13304 367 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 ZC2HC1CQ53FD0 456 aaPredicted RBP4.86□□□□□ -1.63
RBM39-227ENST00000470563 HERC4Q5GLZ8 1057 aaPredicted RBP4.86□□□□□ -1.63
RBM39-227ENST00000470563 FAM46CQ5VWP2 391 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 UGT3A1Q6NUS8 523 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 C9orf139Q6ZV77 190 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 ISCA2Q86U28 154 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 SLC9B2Q86UD5 537 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 GPBP1Q86WP2 473 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 NELFCDQ8IXH7 590 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 ARL10Q8N8L6 244 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 POC1AQ8NBT0 407 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 SLC24A4Q8NFF2 622 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 FBXO25Q8TCJ0 367 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 U2AF1L4Q8WU68 220 aaKnown RBP4.86□□□□□ -1.63
RBM39-227ENST00000470563 ITFG2Q969R8 447 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 SLC35C1Q96A29 364 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 CFAP36Q96G28 342 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 SNF8Q96H20 258 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 C4orf45Q96LM5 186 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 ZNF583Q96ND8 569 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 OLFM3Q96PB7 478 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 TGS1Q96RS0 853 aaKnown RBP4.86□□□□□ -1.63
RBM39-227ENST00000470563 SYT11Q9BT88 431 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 TIPINQ9BVW5 301 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 OSBPL8Q9BZF1 889 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 DPH5Q9H2P9 285 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 VCX3BQ9H321 246 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 SUDS3Q9H7L9 328 aaPredicted RBP4.86□□□□□ -1.63
RBM39-227ENST00000470563 RAVER2Q9HCJ3 691 aaKnown RBP4.86□□□□□ -1.63
RBM39-227ENST00000470563 VCX3AQ9NNX9 186 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 SIX2Q9NPC8 291 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 ADAM22Q9P0K1 906 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 GCNT4Q9P109 453 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 CHKBQ9Y259 395 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 PCDHGB1Q9Y5G3 927 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 COL16A1Q07092 1604 aaPredicted RBP4.86□□□□□ -1.63
RBM39-227ENST00000470563 LY75O60449 1722 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 LTBP1Q14766 1721 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 SIP14410 1827 aa4.86□□□□□ -1.63
RBM39-227ENST00000470563 EME2A4GXA9 379 aaPredicted RBP4.85□□□□□ -1.63
RBM39-227ENST00000470563 FAM172BPA6NC97 362 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 FAM47DPA6NHR8 397 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 A8MXQ7 604 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 TCP11X1B4DZS4 312 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 PRSS46E5RG02 174 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 CACNB4O00305 520 aaPredicted RBP4.85□□□□□ -1.63
RBM39-227ENST00000470563 PEX11AO75192 247 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 SEC22BO75396 215 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 CSDE1O75534 798 aaKnown RBP4.85□□□□□ -1.63
RBM39-227ENST00000470563 F7P08709 466 aaPredicted RBP4.85□□□□□ -1.63
RBM39-227ENST00000470563 KRT16P08779 473 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 TROVE2P10155 538 aaKnown RBP eCLIP4.85□□□□□ -1.63
RBM39-227ENST00000470563 PLA2G2AP14555 144 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 MARK3P27448 753 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 RPA1P27694 616 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 PTPN4P29074 926 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 CTNNB1P35222 781 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 PCK1P35558 622 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 COILP38432 576 aaPredicted RBP4.85□□□□□ -1.63
RBM39-227ENST00000470563 CETN2P41208 172 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 SLC1A1P43005 524 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 NKX2-1P43699 371 aaPredicted RBP4.85□□□□□ -1.63
RBM39-227ENST00000470563 CLK1P49759 484 aaKnown RBP4.85□□□□□ -1.63
RBM39-227ENST00000470563 DNA2P51530 1060 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 DVL1P1P54792 670 aaPredicted RBP4.85□□□□□ -1.63
RBM39-227ENST00000470563 SLC12A3P55017 1021 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 KCNJ2P63252 427 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 RPP38P78345 283 aaKnown RBP4.85□□□□□ -1.63
RBM39-227ENST00000470563 TSTA3Q13630 321 aaPredicted RBP4.85□□□□□ -1.63
RBM39-227ENST00000470563 OPCMLQ14982 345 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 HERC3Q15034 1050 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 TRADDQ15628 312 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 PDK4Q16654 411 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 UGP2Q16851 508 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 HFEQ30201 348 aa4.85□□□□□ -1.63
RBM39-227ENST00000470563 CNSTQ6PJW8 725 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms