RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 PUM1Q14671 1186 aaKnown RBP eCLIP7.55□□□□□ -1.21e-11■■□□□ 13.1
TPM3-215ENST00000469717 PCBP1Q15365 356 aaKnown RBP eCLIP7.55□□□□□ -1.28e-7■■□□□ 13.6
TPM3-215ENST00000469717 C1orf52Q8N6N3 182 aaKnown RBP7.55□□□□□ -1.2
TPM3-215ENST00000469717 OR52H1Q8NGJ2 320 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 HERVK_113Q902F9 699 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 UCN3Q969E3 161 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.55□□□□□ -1.2
TPM3-215ENST00000469717 MTIF3Q9H2K0 278 aaKnown RBP7.55□□□□□ -1.2
TPM3-215ENST00000469717 REV1Q9UBZ9 1251 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 C5orf42Q9H799 3197 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 SMIM35A0A1B0GVV1 85 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 TRBC2A0A5B9 178 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 OR10H3O60404 316 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 C6orf47O95873 294 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 TPOP07202 933 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 ATF6P18850 670 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 ELK1P19419 428 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 CFL1P23528 166 aaKnown RBP7.55□□□□□ -1.2
TPM3-215ENST00000469717 HAAOP46952 286 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 MLLT11Q13015 90 aaPredicted RBP7.55□□□□□ -1.2
TPM3-215ENST00000469717 MBTPS1Q14703 1052 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 GRK1Q15835 563 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 NDUFAF5Q5TEU4 345 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 FRG2Q64ET8 278 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 BHLHB9Q6PI77 547 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 FAM9CQ8IZT9 166 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 STPG2Q8N412 459 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 CLDN22Q8N7P3 220 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 WDR89Q96FK6 387 aaPredicted RBP7.55□□□□□ -1.2
TPM3-215ENST00000469717 CMTM7Q96FZ5 175 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 FRG2BQ96QU4 278 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 PIP5K1AQ99755 562 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 ATF6BQ99941 703 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 ABCG5Q9H222 651 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 SLC32A1Q9H598 525 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 LIN7BQ9HAP6 207 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 COL4A4P53420 1690 aaPredicted RBP7.55□□□□□ -1.2
TPM3-215ENST00000469717 DOCK3Q8IZD9 2030 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 TDRD15B5MCY1 1934 aaKnown RBP7.55□□□□□ -1.2
TPM3-215ENST00000469717 K7ERQ8 282 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 PROM1O43490 865 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 ACSM4P0C7M7 580 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 BTCP35070 178 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 EVX1P49640 407 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 CCR6P51684 374 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 DCDC1P59894 354 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 LAPTM4BQ86VI4 370 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 MS4A15Q8N5U1 240 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 DNAJB8Q8NHS0 232 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 RBPMSQ93062 196 aaKnown RBP7.55□□□□□ -1.2
TPM3-215ENST00000469717 CXorf58Q96LI9 332 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 SORCS2Q96PQ0 1159 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 KCNJ15Q99712 375 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 ADGRE3Q9BY15 652 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 NLGN3Q9NZ94 848 aa7.55□□□□□ -1.2
TPM3-215ENST00000469717 FCF1Q9Y324 198 aaKnown RBP7.55□□□□□ -1.2
TPM3-215ENST00000469717 UNC80Q8N2C7 3258 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 SH3D21A4FU49 640 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 ATG13O75143 517 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 MTX2O75431 263 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 SERPINI2O75830 405 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 CLDN7O95471 211 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 F11P03951 625 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 RRASP10301 218 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 HSD3B1P14060 373 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 PTNP21246 168 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 TACR2P21452 398 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 KELP23276 732 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 PCGF2P35227 344 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 CBX5P45973 191 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 CACNG1Q06432 222 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 RIN1Q13671 783 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 C1DQ13901 141 aaKnown RBP7.54□□□□□ -1.2
TPM3-215ENST00000469717 SLC5A12Q1EHB4 618 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 GPRC6AQ5T6X5 926 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 ZNF770Q6IQ21 691 aaPredicted RBP7.54□□□□□ -1.2
TPM3-215ENST00000469717 ACSM5Q6NUN0 579 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 ZNF600Q6ZNG1 722 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 USP45Q70EL2 814 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 NPAS3Q8IXF0 933 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 LRRC17Q8N6Y2 441 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 ZC3HAV1LQ96H79 300 aaKnown RBP7.54□□□□□ -1.2
TPM3-215ENST00000469717 LRR1Q96L50 414 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 SOSTQ9BQB4 213 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 EXTL2Q9UBQ6 330 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 SF3B6Q9Y3B4 125 aaKnown RBP7.54□□□□□ -1.2
TPM3-215ENST00000469717 MBLAC1A4D2B0 266 aaPredicted RBP7.54□□□□□ -1.2
TPM3-215ENST00000469717 EEF1E1O43324 174 aaKnown RBP7.54□□□□□ -1.2
TPM3-215ENST00000469717 HCN1O60741 890 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 LGI1O95970 557 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 HLA-DQB1P01920 261 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 ANXA5P08758 320 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 DGKAP23743 735 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 AOAHP28039 575 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 VIPR1P32241 457 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 LIMS1P48059 325 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 ARHGDIBP52566 201 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 PCDH1Q08174 1060 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 PUDPQ08623 228 aa7.54□□□□□ -1.2
TPM3-215ENST00000469717 TAF10Q12962 218 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 501.7 ms