RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 F10P00742 488 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 JUNP05412 331 aaKnown RBP13.51□□□□□ -0.25
COL27A1-203ENST00000468565 HIST1H1TP22492 207 aaPredicted RBP13.51□□□□□ -0.25
COL27A1-203ENST00000468565 EEF1DP29692 281 aaKnown RBP13.51□□□□□ -0.25
COL27A1-203ENST00000468565 HNRNPFP52597 415 aaKnown RBP13.51□□□□□ -0.25
COL27A1-203ENST00000468565 SLC13A2Q13183 592 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 MAPRE2Q15555 327 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 ZNF678Q5SXM1 525 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 TMEM198Q66K66 360 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 FCRLBQ6BAA4 426 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 FAM180AQ6UWF9 173 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 ST6GALNAC3Q8NDV1 305 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 TMEM52Q8NDY8 209 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 CSF3RQ99062 836 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 CENPKQ9BS16 269 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 GSTO2Q9H4Y5 243 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 EFCAB1Q9HAE3 211 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 DMRT3Q9NQL9 472 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 KCMF1Q9P0J7 381 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 BCAP29Q9UHQ4 241 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 PPIEQ9UNP9 301 aaKnown RBP13.51□□□□□ -0.25
COL27A1-203ENST00000468565 POMPQ9Y244 141 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 FIS1Q9Y3D6 152 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 PCDHGB6Q9Y5F9 930 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 SPACA6W5XKT8 324 aa13.51□□□□□ -0.25
COL27A1-203ENST00000468565 ANKUB1A6NFN9 424 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 PRAMEF2O60811 474 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 CTNSO60931 367 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 SKAP2O75563 359 aaPredicted RBP13.5□□□□□ -0.25
COL27A1-203ENST00000468565 SUPT7LO94864 414 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 CLDN9O95484 217 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 EDN3P14138 238 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 HERVK_113P63132 956 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 ART3Q13508 389 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 DDX39BQ13838 428 aaKnown RBP13.5□□□□□ -0.25
COL27A1-203ENST00000468565 CCNIQ14094 377 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 SQLEQ14534 574 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 BNC2Q6ZN30 1099 aaPredicted RBP13.5□□□□□ -0.25
COL27A1-203ENST00000468565 BCORP1Q8N888 145 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 C7orf57Q8NEG2 295 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 B3GNT7Q8NFL0 401 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 SLC26A7Q8TE54 656 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 RGMAQ96B86 450 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 CCDC124Q96CT7 223 aaKnown RBP13.5□□□□□ -0.25
COL27A1-203ENST00000468565 NTMT1Q9BV86 223 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 ERVK-6Q9BXR3 956 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 NOL11Q9H8H0 719 aaKnown RBP13.5□□□□□ -0.25
COL27A1-203ENST00000468565 ADAP2Q9NPF8 381 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 PCTPQ9UKL6 214 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 PPT2Q9UMR5 302 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 LRCH1Q9Y2L9 728 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 TRAF6Q9Y4K3 522 aa13.5□□□□□ -0.25
COL27A1-203ENST00000468565 TGFBR3LH3BV60 316 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 RTCAO00442 366 aaKnown RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 OR7A17O14581 309 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 PTX3P26022 381 aaPredicted RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 SSR2P43308 183 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 TUBA3CQ13748 450 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 ELOAQ14241 798 aaKnown RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 CPSF6Q16630 551 aaKnown RBP eCLIP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 UNC50Q53HI1 259 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 OR4C11Q6IEV9 310 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 TUBA3EQ6PEY2 450 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 RPS19BP1Q86WX3 136 aaKnown RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 PGAM4Q8N0Y7 254 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 ARMC10Q8N2F6 343 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 WDR20Q8TBZ3 569 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 RCN3Q96D15 328 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 MAPKAP1Q9BPZ7 522 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 SLX1AQ9BQ83 275 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 UTP23Q9BRU9 249 aaKnown RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 VCX3BQ9H321 246 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 OR51B5Q9H339 312 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 RNF11Q9Y3C5 154 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 SETXQ7Z333 2677 aaKnown RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 A8MUA0 341 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 FOXE1O00358 373 aaPredicted RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 SH3BGRLO75368 114 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 MYO1DO94832 1006 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 RPS17P08708 135 aaKnown RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 CLCN2P51788 898 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 RPS13P62277 151 aaKnown RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 BLMHQ13867 455 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 EIF2S3LQ2VIR3 472 aaKnown RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 TCHHL1Q5QJ38 904 aaPredicted RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 C10orf62Q5T681 223 aaPredicted RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 ZCCHC7Q8N3Z6 543 aaKnown RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 RNF175Q8N4F7 328 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 APCDD1LQ8NCL9 501 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 MDS2Q8NDY4 140 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 RNF217Q8TC41 542 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 ATP6V1E2Q96A05 226 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 VMP1Q96GC9 406 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 MARK4Q96L34 752 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 TAAR6Q96RI8 345 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 MTERF1Q99551 399 aaKnown RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 ZNF184Q99676 751 aaPredicted RBP13.49□□□□□ -0.25
COL27A1-203ENST00000468565 C1QTNF3Q9BXJ4 246 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 CDCP1Q9H5V8 836 aa13.49□□□□□ -0.25
COL27A1-203ENST00000468565 PNO1Q9NRX1 252 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms