RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 MSH2P43246 934 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 RPL21P46778 160 aaKnown RBP11.11□□□□□ -0.63
UBR4-211ENST00000467272 ARFIP1P53367 373 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 HNRNPH2P55795 449 aaKnown RBP11.11□□□□□ -0.63
UBR4-211ENST00000467272 HERVK_113P63132 956 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 ERVK-8P63133 956 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 TNFRSF17Q02223 184 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 KRTAP1-1Q07627 177 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 FUT7Q11130 342 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 POU4F3Q15319 338 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 OR4D1Q15615 310 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 PDK4Q16654 411 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 FBXO48Q5FWF7 155 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 TIGD3Q6B0B8 471 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 OR4C11Q6IEV9 310 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 SULT1C3Q6IMI6 304 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 TMEM64Q6YI46 380 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 GPR180Q86V85 440 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 ZNF615Q8N8J6 731 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 C17orf47Q8NEP4 570 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 OR7G3Q8NG95 312 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 ACTRT1Q8TDG2 376 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 DIO2Q92813 273 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 LRRC39Q96DD0 335 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 PBKQ96KB5 322 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 JSRP1Q96MG2 331 aaPredicted RBP11.11□□□□□ -0.63
UBR4-211ENST00000467272 ZFP3Q96NJ6 502 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 TRIB1Q96RU8 372 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 TUBA1CQ9BQE3 449 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 RBM24Q9BX46 236 aaKnown RBP11.11□□□□□ -0.63
UBR4-211ENST00000467272 SORBS1Q9BX66 1292 aaKnown RBP11.11□□□□□ -0.63
UBR4-211ENST00000467272 ERVK-6Q9BXR3 956 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 CLCF1Q9UBD9 225 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 ERVK-19Q9WJR5 959 aa11.11□□□□□ -0.63
UBR4-211ENST00000467272 NCF1BA6NI72 391 aaPredicted RBP11.1□□□□□ -0.63
UBR4-211ENST00000467272 NCF1CA8MVU1 366 aaPredicted RBP11.1□□□□□ -0.63
UBR4-211ENST00000467272 EEF1E1-BLOC1S5C9J1V9 151 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 INAFM1C9JVW0 142 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 PLPP1O14494 284 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 CLGNO14967 610 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 CTIFO43310 598 aaKnown RBP11.1□□□□□ -0.63
UBR4-211ENST00000467272 EEF1E1O43324 174 aaKnown RBP11.1□□□□□ -0.63
UBR4-211ENST00000467272 ACTL6AO96019 429 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 SLC35E2BP0CK96 405 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 SLC35E2P0CK97 266 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 TMIGD3P0DMS9 266 aaPredicted RBP11.1□□□□□ -0.63
UBR4-211ENST00000467272 NCF1P14598 390 aaPredicted RBP11.1□□□□□ -0.63
UBR4-211ENST00000467272 CD1DP15813 335 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 S1PR1P21453 382 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 SERPINB1P30740 379 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 PTGDSP41222 190 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 HSPA7P48741 367 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 GFRA1P56159 465 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 CHIT1Q13231 466 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 SLAMF1Q13291 335 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 CAPRIN1Q14444 709 aaKnown RBP11.1□□□□□ -0.63
UBR4-211ENST00000467272 AP5B1Q2VPB7 878 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 PAGE2BQ5JRK9 111 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 RNF111Q6ZNA4 994 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 SLC29A4Q7RTT9 530 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 SPATA6LQ8N4H0 392 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 SPC24Q8NBT2 197 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 FAM83FQ8NEG4 500 aaPredicted RBP11.1□□□□□ -0.63
UBR4-211ENST00000467272 DOK4Q8TEW6 326 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 GRK7Q8WTQ7 553 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 SLC44A1Q8WWI5 657 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 NANOS1Q8WY41 292 aaKnown RBP11.1□□□□□ -0.63
UBR4-211ENST00000467272 ABTB1Q969K4 478 aaPredicted RBP11.1□□□□□ -0.63
UBR4-211ENST00000467272 PIGTQ969N2 578 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 CMTM7Q96FZ5 175 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 GAL3ST4Q96RP7 486 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 PELOQ9BRX2 385 aaKnown RBP11.1□□□□□ -0.63
UBR4-211ENST00000467272 RHOJQ9H4E5 214 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 CNOT10Q9H9A5 744 aaKnown RBP11.1□□□□□ -0.63
UBR4-211ENST00000467272 CXorf21Q9HAI6 301 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 PPANQ9NQ55 473 aaKnown RBP11.1□□□□□ -0.63
UBR4-211ENST00000467272 TEX10Q9NXF1 929 aaPredicted RBP11.1□□□□□ -0.63
UBR4-211ENST00000467272 CAMK2AQ9UQM7 478 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 SPACA6W5XKT8 324 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 MED12Q93074 2177 aa11.1□□□□□ -0.63
UBR4-211ENST00000467272 RTTNQ86VV8 2226 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 NINQ8N4C6 2090 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 A0A0A6YYD5 115 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 IQANK1A0A1B0GTG1 560 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 A0A1W2PR48 441 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 A0A1W2PS29 197 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 TRIM64A6NGJ6 449 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 TRIM64BA6NI03 449 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 PGRMC1O00264 195 aaKnown RBP11.09□□□□□ -0.63
UBR4-211ENST00000467272 TP53I11O14683 189 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 TMPRSS11DO60235 418 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 SMPD2O60906 423 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 TRAPPC6AO75865 159 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 TGFB1P01137 390 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 ABCB1P08183 1280 aaPredicted RBP11.09□□□□□ -0.63
UBR4-211ENST00000467272 PCSK6P29122 969 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 BSGP35613 385 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 MC3RP41968 323 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 PIK3CBP42338 1070 aa11.09□□□□□ -0.63
UBR4-211ENST00000467272 SSR2P43308 183 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms