RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 GALNT12Q8IXK2 581 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 CCDC116Q8IYX3 515 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 TMEM102Q8N9M5 508 aaPredicted RBP14.18□□□□□ -0.14
NPHP4-205ENST00000466897 NFAM1Q8NET5 270 aaPredicted RBP14.18□□□□□ -0.14
NPHP4-205ENST00000466897 B3GNT7Q8NFL0 401 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 OR5P2Q8WZ92 322 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 CIDECQ96AQ7 238 aaPredicted RBP14.18□□□□□ -0.14
NPHP4-205ENST00000466897 C8orf44Q96CB5 159 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 MESP1Q9BRJ9 268 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 SEMA4CQ9C0C4 833 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 MYLK2Q9H1R3 596 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 SLC52A3Q9NQ40 469 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 PNO1Q9NRX1 252 aaKnown RBP14.18□□□□□ -0.14
NPHP4-205ENST00000466897 MAT2BQ9NZL9 334 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 CCDC167Q9P0B6 97 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 ZNF639Q9UID6 485 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 BTNL2Q9UIR0 455 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 FBXL4Q9UKA2 621 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 CFAP47Q6ZTR5 3102 aa14.18□□□□□ -0.14
NPHP4-205ENST00000466897 A0A087WV62 115 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 A0A1W2PRB8 838 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 CDC14CA4D256 554 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 FCHO1O14526 889 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 CFLARO15519 480 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 PLOD3O60568 738 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 DDAH2O95865 285 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 IGKV3-11P04433 115 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 NT5EP21589 574 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 GPR143P51810 404 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 MANFP55145 182 aaKnown RBP14.17□□□□□ -0.14
NPHP4-205ENST00000466897 PHC1P78364 1004 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 VAC14Q08AM6 782 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 MGAT2Q10469 447 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 FUT7Q11130 342 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 KLF10Q13118 480 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 MAPRE2Q15555 327 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 AGKQ53H12 422 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 DCAF10Q5QP82 559 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 C6orf163Q5TEZ5 329 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 OR4F3Q6IEY1 312 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 FAM180BQ6P0A1 224 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 MTDHQ86UE4 582 aaKnown RBP14.17□□□□□ -0.14
NPHP4-205ENST00000466897 VWA5B2Q8N398 1253 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 CCDC197Q8NCU1 140 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 OR7G1Q8NGA0 311 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 OR1N1Q8NGS0 311 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 GOT1L1Q8NHS2 421 aaPredicted RBP14.17□□□□□ -0.14
NPHP4-205ENST00000466897 M1APQ8TC57 530 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 CCDC115Q96NT0 180 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 OR52E6Q96RD3 313 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 MMP25Q9NPA2 562 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 WDR70Q9NW82 654 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 NTMQ9P121 344 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 PTGFRNQ9P2B2 879 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 CAPN7Q9Y6W3 813 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 CHD8Q9HCK8 2581 aa14.17□□□□□ -0.14
NPHP4-205ENST00000466897 TPRP12270 2363 aaKnown RBP14.16□□□□□ -0.14
NPHP4-205ENST00000466897 IGHV3-20A0A0C4DH32 117 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 BCAS2O75934 225 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-205ENST00000466897 SEC24DO94855 1032 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-205ENST00000466897 TNNI3P19429 210 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 SOX18P35713 384 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 DGKQP52824 942 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 SOX8P57073 446 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 AIMP2Q13155 320 aaKnown RBP14.16□□□□□ -0.14
NPHP4-205ENST00000466897 UBAP2LQ14157 1087 aaKnown RBP14.16□□□□□ -0.14
NPHP4-205ENST00000466897 FAM91A1Q658Y4 838 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 TMEM64Q6YI46 380 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 DGAT2L6Q6ZPD8 337 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 APLFQ8IW19 511 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-205ENST00000466897 APCDD1LQ8NCL9 501 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 OR9A2Q8NGT5 310 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 OR8K3Q8NH51 312 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 SLC2A12Q8TD20 617 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 ZNF721Q8TF20 911 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 NUDT8Q8WV74 236 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 PPWD1Q96BP3 646 aaKnown RBP14.16□□□□□ -0.14
NPHP4-205ENST00000466897 SPDL1Q96EA4 605 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 VMP1Q96GC9 406 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 SENP5Q96HI0 755 aaPredicted RBP14.16□□□□□ -0.14
NPHP4-205ENST00000466897 CCDC106Q9BWC9 280 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 RMND5AQ9H871 391 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 RYDENQ9NUL5 291 aaKnown RBP14.16□□□□□ -0.14
NPHP4-205ENST00000466897 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.16□□□□□ -0.14
NPHP4-205ENST00000466897 TAS2R9Q9NYW1 312 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 MAN2B2Q9Y2E5 1009 aa14.16□□□□□ -0.14
NPHP4-205ENST00000466897 ANKRD11Q6UB99 2663 aaPredicted RBP14.15□□□□□ -0.14
NPHP4-205ENST00000466897 MED13Q9UHV7 2174 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 A0A1W2PP18 115 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 CCDC154A6NI56 674 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 OR6C76A6NM76 312 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 C9JVG2 144 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 SERPINA7P05543 415 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 SNRPB2P08579 225 aaKnown RBP14.15□□□□□ -0.14
NPHP4-205ENST00000466897 CT62P0C5K7 136 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 PRKAR1AP10644 381 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 CAPN3P20807 821 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 S1PR1P21453 382 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 ITPKBP27987 946 aa14.15□□□□□ -0.14
NPHP4-205ENST00000466897 HSPB3Q12988 150 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms