RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 DNAJC14Q6Y2X3 702 aaPredicted RBP17.56■□□□□ 0.4
CAPN3-209ENST00000466222 OR5T3Q8NGG3 340 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 CIDECQ96AQ7 238 aaPredicted RBP17.56■□□□□ 0.4
CAPN3-209ENST00000466222 REXO5Q96IC2 774 aaKnown RBP17.56■□□□□ 0.4
CAPN3-209ENST00000466222 QRFPRQ96P65 431 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 MBOAT4Q96T53 435 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 MAPKAP1Q9BPZ7 522 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 TBCDQ9BTW9 1192 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 REEP4Q9H6H4 257 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 GPN2Q9H9Y4 310 aaPredicted RBP17.56■□□□□ 0.4
CAPN3-209ENST00000466222 PALMDQ9NP74 551 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 MYNNQ9NPC7 610 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 TBC1D23Q9NUY8 699 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 ASB4Q9Y574 426 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 ORC6Q9Y5N6 252 aa17.56■□□□□ 0.4
CAPN3-209ENST00000466222 IGHV5-10-1A0A0J9YXX1 117 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 A0A1W2PR48 441 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 PRKD3O94806 890 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 ASMTP46597 345 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 STT3AP46977 705 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 ARL4DP49703 201 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 GZMMP51124 257 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 RAD23AP54725 363 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 NKG7Q16617 165 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 GTDC1Q4AE62 458 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 C6orf141Q5SZD1 244 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 C18orf63Q68DL7 685 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 CLECL1Q8IZS7 167 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 FAM86B1Q8N7N1 296 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 MIPOL1Q8TD10 442 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 NCLNQ969V3 563 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 IKZF5Q9H5V7 419 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 FANCEQ9HB96 536 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 SERHLQ9NQF3 203 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 IRAK4Q9NWZ3 460 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 PLCL2Q9UPR0 1127 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 C4orf47A7E2U8 309 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 ZSCAN9O15535 394 aaPredicted RBP17.55■□□□□ 0.4
CAPN3-209ENST00000466222 SCN2BO60939 215 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 GSNP06396 782 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 HOXB9P17482 250 aaPredicted RBP17.55■□□□□ 0.4
CAPN3-209ENST00000466222 ALOX12P18054 663 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 TGM1P22735 817 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 CDKN2CP42773 168 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 KIR3DL1P43629 444 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 YAP1P46937 504 aaKnown RBP17.55■□□□□ 0.4
CAPN3-209ENST00000466222 RUNX2Q13950 521 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 SLC9A5Q14940 896 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 MOGQ16653 247 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 DPY19L1Q2PZI1 675 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 PRTGQ2VWP7 1150 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 CCDC157Q569K6 752 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 NDUFAF5Q5TEU4 345 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 MRM1Q6IN84 353 aaKnown RBP17.55■□□□□ 0.4
CAPN3-209ENST00000466222 TBC1D15Q8TC07 691 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 SLC41A2Q96JW4 573 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 SEMA5BQ9P283 1151 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 ADAM29Q9UKF5 820 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 NAALAD2Q9Y3Q0 740 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 PCDHB14Q9Y5E9 798 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 PCDHGB2Q9Y5G2 931 aa17.55■□□□□ 0.4
CAPN3-209ENST00000466222 HEATR5BQ9P2D3 2071 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 A0A1W2PPW3 197 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 SGK494L7N484 410 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 PGRMC2O15173 223 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 SLC16A6O15403 523 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 FLRT2O43155 660 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 SRPX2O60687 465 aaPredicted RBP17.54■□□□□ 0.4
CAPN3-209ENST00000466222 RYKP34925 604 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 DCTP40126 519 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 C21orf58P58505 322 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 NFATC3Q12968 1075 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 SQSTM1Q13501 440 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 CPTPQ5TA50 214 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 PRSS42Q7Z5A4 293 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 R3HCC1LQ7Z5L2 792 aaKnown RBP17.54■□□□□ 0.4
CAPN3-209ENST00000466222 B3GNT8Q7Z7M8 397 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 METTL27Q8N6F8 245 aaPredicted RBP17.54■□□□□ 0.4
CAPN3-209ENST00000466222 CHDHQ8NE62 594 aaPredicted RBP17.54■□□□□ 0.4
CAPN3-209ENST00000466222 SRFBP1Q8NEF9 429 aaKnown RBP17.54■□□□□ 0.4
CAPN3-209ENST00000466222 OR9A4Q8NGU2 314 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 KLHL6Q8WZ60 621 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 PYURFQ96I23 114 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 C10orf90Q96M02 699 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 GABARAPL1Q9H0R8 117 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 ADNPQ9H2P0 1102 aa17.54■□□□□ 0.4
CAPN3-209ENST00000466222 SAMD4AQ9UPU9 718 aaKnown RBP17.54■□□□□ 0.4
CAPN3-209ENST00000466222 HEMK1Q9Y5R4 338 aaPredicted RBP17.54■□□□□ 0.4
CAPN3-209ENST00000466222 A0A1W2PS29 197 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 TMEM150CB9EJG8 249 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 H3BMH7 237 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 PRMT3O60678 531 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 ITGAMP11215 1152 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 POLR2IP36954 125 aaKnown RBP17.53■□□□□ 0.4
CAPN3-209ENST00000466222 MAGEA2P43356 314 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 KCNAB2Q13303 367 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 PDE7AQ13946 482 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 C16orf72Q14CZ0 275 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 XAF1Q6GPH4 301 aa17.53■□□□□ 0.4
CAPN3-209ENST00000466222 Q6ZNX1 250 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms