RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CTHRC1Q96CG8 243 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 CNPPD1Q9BV87 410 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 MFRPQ9BY79 579 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 NUF2Q9BZD4 464 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 TRIM45Q9H8W5 580 aaPredicted RBP18.88■□□□□ 0.61
SKA3-205ENST00000465471 PLA2G3Q9NZ20 509 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 MAT2BQ9NZL9 334 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 ZNF639Q9UID6 485 aa18.88■□□□□ 0.61
SKA3-205ENST00000465471 DYTNA2CJ06 578 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 OR5H15A6NDH6 313 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 GABRR3A8MPY1 467 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 MYO1GB0I1T2 1018 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 TRHRP34981 398 aaPredicted RBP18.87■□□□□ 0.61
SKA3-205ENST00000465471 ASMTP46597 345 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 ARG2P78540 354 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 EMX2Q04743 252 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 TUBA3CQ13748 450 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 PLEKHN1Q494U1 663 aaPredicted RBP18.87■□□□□ 0.61
SKA3-205ENST00000465471 TUBA3EQ6PEY2 450 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 FNDC5Q8NAU1 212 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 NUBPLQ8TB37 319 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 ZNF675Q8TD23 568 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 DOK4Q8TEW6 326 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 C7orf26Q96N11 449 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 TSSK3Q96PN8 268 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 C1orf50Q9BV19 199 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 AKTIPQ9H8T0 292 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 MIEF1Q9NQG6 463 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 INTS9Q9NV88 658 aaKnown RBP18.87■□□□□ 0.61
SKA3-205ENST00000465471 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.87■□□□□ 0.61
SKA3-205ENST00000465471 ABI3Q9P2A4 366 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 MYOTQ9UBF9 498 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 BAIAP2L1Q9UHR4 511 aa18.87■□□□□ 0.61
SKA3-205ENST00000465471 OR6C76A6NM76 312 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 HDAC3O15379 428 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 PRPS2P11908 318 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 NT5EP21589 574 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 MAD2L1Q13257 205 aaPredicted RBP18.86■□□□□ 0.61
SKA3-205ENST00000465471 TLR1Q15399 786 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 ZNF628Q5EBL2 1059 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 COLEC12Q5KU26 742 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 IL23RQ5VWK5 629 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 RNF111Q6ZNA4 994 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 VWA5B2Q8N398 1253 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 LIX1Q8N485 282 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 ZNF615Q8N8J6 731 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 MDS2Q8NDY4 140 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 CATSPER1Q8NEC5 780 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 CLHC1Q8NHS4 586 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 PPP1R36Q96LQ0 422 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 EPN3Q9H201 632 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 REEP4Q9H6H4 257 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 GIMAP4Q9NUV9 329 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 ENTPD4Q9Y227 616 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 PCDHGA10Q9Y5H3 936 aa18.86■□□□□ 0.61
SKA3-205ENST00000465471 HEMK1Q9Y5R4 338 aaPredicted RBP18.86■□□□□ 0.61
SKA3-205ENST00000465471 SLCO1B7G3V0H7 640 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 SDHDO14521 159 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 FCHO1O14526 889 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 ZNF195O14628 629 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 ATP8B1O43520 1251 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 VPS4BO75351 444 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 ITGA10O75578 1167 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 SSTR4P31391 388 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 PTGER1P34995 402 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 CD96P40200 585 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 C21orf58P58505 322 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 DUSP8Q13202 625 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 PTGR1Q14914 329 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 ZNF169Q14929 603 aaPredicted RBP18.85■□□□□ 0.61
SKA3-205ENST00000465471 EBPQ15125 230 aaKnown RBP18.85■□□□□ 0.61
SKA3-205ENST00000465471 LTB4RQ15722 352 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 ZNF468Q5VIY5 522 aaPredicted RBP18.85■□□□□ 0.61
SKA3-205ENST00000465471 OGFOD2Q6N063 350 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 FAM111BQ6SJ93 734 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 LARP4Q71RC2 724 aaKnown RBP eCLIP18.85■□□□□ 0.61
SKA3-205ENST00000465471 WDR75Q8IWA0 830 aaKnown RBP18.85■□□□□ 0.61
SKA3-205ENST00000465471 CCDC116Q8IYX3 515 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 ZNF441Q8N8Z8 693 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 OR7G1Q8NGA0 311 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 OR5L2Q8NGL0 311 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 PIWIL2Q8TC59 973 aaKnown RBP18.85■□□□□ 0.61
SKA3-205ENST00000465471 LRRC8CQ8TDW0 803 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 THAP3Q8WTV1 239 aaPredicted RBP18.85■□□□□ 0.61
SKA3-205ENST00000465471 CKAP2Q8WWK9 683 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 ERP27Q96DN0 273 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 MTERF3Q96E29 417 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 SLAMF7Q9NQ25 335 aa18.85■□□□□ 0.61
SKA3-205ENST00000465471 MARCOQ9UEW3 520 aaPredicted RBP18.85■□□□□ 0.61
SKA3-205ENST00000465471 YARS2Q9Y2Z4 477 aaKnown RBP18.85■□□□□ 0.61
SKA3-205ENST00000465471 TRAV17A0A0B4J275 112 aa18.84■□□□□ 0.61
SKA3-205ENST00000465471 CBX7O95931 251 aa18.84■□□□□ 0.61
SKA3-205ENST00000465471 F10P00742 488 aa18.84■□□□□ 0.61
SKA3-205ENST00000465471 FRKP42685 505 aaPredicted RBP18.84■□□□□ 0.61
SKA3-205ENST00000465471 MPEG1Q2M385 716 aa18.84■□□□□ 0.61
SKA3-205ENST00000465471 ZNF385BQ569K4 471 aa18.84■□□□□ 0.61
SKA3-205ENST00000465471 C6orf163Q5TEZ5 329 aa18.84■□□□□ 0.61
SKA3-205ENST00000465471 C16orf47Q6ZP98 133 aaPredicted RBP18.84■□□□□ 0.61
SKA3-205ENST00000465471 RGS9BPQ6ZS82 235 aa18.84■□□□□ 0.61
SKA3-205ENST00000465471 MAVSQ7Z434 540 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms