RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 RACGAP1Q9H0H5 632 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 HHATLQ9HCP6 504 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 PRSS16Q9NQE7 514 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 TAS2R7Q9NYW3 318 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 CLEC2DQ9UHP7 191 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 ACSL5Q9ULC5 683 aa17.33■□□□□ 0.36
SYNE4-204ENST00000465425 CSO75390 466 aaKnown RBP17.32■□□□□ 0.36
SYNE4-204ENST00000465425 CLEC3AO75596 197 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 GPX5O75715 221 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 MAGP20916 626 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 OPRD1P41143 372 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 TPTEP56180 551 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 ZNF91Q05481 1191 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 MFSD4BQ5TF39 518 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 TMC5Q6UXY8 1006 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 SPRED2Q7Z698 418 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 TBC1D19Q8N5T2 526 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 C12orf76Q8N812 135 aaPredicted RBP17.32■□□□□ 0.36
SYNE4-204ENST00000465425 TTLQ8NG68 377 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 AMDHD1Q96NU7 426 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 MVB12BQ9H7P6 319 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 SLC35C2Q9NQQ7 365 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 TVP23BQ9NYZ1 205 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 KLHL3Q9UH77 587 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 A4GNTQ9UNA3 340 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 KLHL20Q9Y2M5 609 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 OR1A2Q9Y585 309 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 A0A0A6YYD5 115 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 A0A1W2PRQ8 180 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 LOC110117498-PIK3R3F6TDL0 507 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 MYL12BO14950 172 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 SNPHO15079 494 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 PPM1DO15297 605 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 ACP5P13686 325 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 ETV6P41212 452 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 KHKP50053 298 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 ANXA11P50995 505 aaKnown RBP17.32■□□□□ 0.36
SYNE4-204ENST00000465425 OR9Q1Q8NGQ5 310 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 PIK3R3Q92569 461 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 ASPNQ9BXN1 380 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 MIR1-1HGQ9H1L0 117 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 WDR26Q9H7D7 661 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 KCNK12Q9HB15 430 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 IMP3Q9NV31 184 aaKnown RBP17.32■□□□□ 0.36
SYNE4-204ENST00000465425 EHD3Q9NZN3 535 aa17.32■□□□□ 0.36
SYNE4-204ENST00000465425 CAB39Q9Y376 341 aaPredicted RBP17.32■□□□□ 0.36
SYNE4-204ENST00000465425 PRAMEF27A3QJZ7 478 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 LRIT2A6NDA9 550 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 GLOD5A6NK44 160 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 RGS5O15539 181 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 ERAL1O75616 437 aaKnown RBP17.31■□□□□ 0.36
SYNE4-204ENST00000465425 SLITRK5O94991 958 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 CD72P21854 359 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 GJA8P48165 433 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 PRDX1Q06830 199 aaKnown RBP17.31■□□□□ 0.36
SYNE4-204ENST00000465425 COX10Q12887 443 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 KRT33BQ14525 404 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 SLC9A5Q14940 896 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 PODNL1Q6PEZ8 512 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 BCDIN3DQ7Z5W3 292 aaKnown RBP17.31■□□□□ 0.36
SYNE4-204ENST00000465425 OTUB1Q96FW1 271 aaPredicted RBP17.31■□□□□ 0.36
SYNE4-204ENST00000465425 ASB16Q96NS5 453 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 SLC30A2Q9BRI3 323 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 POLR2J2Q9GZM3 115 aaKnown RBP17.31■□□□□ 0.36
SYNE4-204ENST00000465425 WDR37Q9Y2I8 494 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 LSM2Q9Y333 95 aaKnown RBP17.31■□□□□ 0.36
SYNE4-204ENST00000465425 NUMA1Q14980 2115 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 C5orf42Q9H799 3197 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 CTDSP2O14595 271 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 TLX2O43763 284 aaPredicted RBP17.31■□□□□ 0.36
SYNE4-204ENST00000465425 APOA1P02647 267 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 MAGEA8P43361 318 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 DOC2BQ14184 412 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 NDUFA9Q16795 377 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 BHLHB9Q6PI77 547 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 GDPGP1Q6ZNW5 385 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 CCDC190Q86UF4 302 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 CACTIN-AS1Q8N1I8 211 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 IQCF1Q8N6M8 205 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 BBS10Q8TAM1 723 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 ABHD8Q96I13 439 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 XKR8Q9H6D3 395 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 SEC14L4Q9UDX3 406 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.31■□□□□ 0.36
SYNE4-204ENST00000465425 RWDD3Q9Y3V2 267 aa17.31■□□□□ 0.36
SYNE4-204ENST00000465425 SNX4O95219 450 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 BUD31P41223 144 aaPredicted RBP17.3■□□□□ 0.36
SYNE4-204ENST00000465425 RAB28P51157 221 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 GNA13Q14344 377 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 PDGFRLQ15198 375 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 OCLNQ16625 522 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 AKAP14Q86UN6 197 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 LINC00471Q8N535 108 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 FLCNQ8NFG4 579 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 OR4K5Q8NGD3 323 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 CREB3L4Q8TEY5 395 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 SMARCD2Q92925 531 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 INSM2Q96T92 566 aaPredicted RBP17.3■□□□□ 0.36
SYNE4-204ENST00000465425 YIPF4Q9BSR8 244 aa17.3■□□□□ 0.36
SYNE4-204ENST00000465425 MBNL1Q9NR56 388 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms