RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 IKBKGQ9Y6K9 419 aa13.23□□□□□ -0.29
SNRNP40-203ENST00000463988 TRGV5A0A0B4J1U4 118 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 CAPN14A8MX76 684 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 FAM47E-STBD1D6RA91 191 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 SMIM24O75264 130 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 URI1O94763 535 aaPredicted RBP13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 ACSL3O95573 720 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 CLPSP04118 112 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 CELA3AP09093 270 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 PIK3R1P27986 724 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 MSX1P28360 303 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 ARL1P40616 181 aaPredicted RBP13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 TLE4Q04727 773 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 FUT7Q11130 342 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 TRAF3Q13114 568 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 UBAP2Q5T6F2 1119 aaKnown RBP13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 WLSQ5T9L3 541 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 ZNF585AQ6P3V2 769 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 B3GNT6Q6ZMB0 384 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 PAGE2Q7Z2X7 111 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 CCDC71Q8IV32 467 aaPredicted RBP13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 FAM13CQ8NE31 585 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 MYRIPQ8NFW9 859 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 OR10G3Q8NGC4 313 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 TRPC4APQ8TEL6 797 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 PHF21BQ96EK2 531 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 CDK15Q96Q40 435 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 GAL3ST4Q96RP7 486 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 SECISBP2Q96T21 854 aaKnown RBP13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 PAFAH2Q99487 392 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 MRPL57Q9BQC6 102 aaKnown RBP13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 UCK2Q9BZX2 261 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 LDAHQ9H6V9 325 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 SLC24A3Q9HC58 644 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 ZBTB26Q9HCK0 441 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 NPDC1Q9NQX5 325 aaPredicted RBP13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 XPR1Q9UBH6 696 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 DMGDHQ9UI17 866 aaKnown RBP13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 CNOT11Q9UKZ1 510 aaKnown RBP13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 FAM215AQ9Y5M1 114 aa13.22□□□□□ -0.29
SNRNP40-203ENST00000463988 ANKHD1Q8IWZ3 2542 aaKnown RBP13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 C2orf92A0A1B0GVN3 265 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 NKX2-6A6NCS4 301 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 LRRC3CA6NJW4 275 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 TP53I11O14683 189 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 PGRMC2O15173 223 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 GUCY1B2O75343 617 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 GBAP04062 536 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 RPS17P08708 135 aaKnown RBP13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 GLI4P10075 376 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 GABRA1P14867 456 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 IFT88Q13099 833 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 GLE1Q53GS7 698 aaKnown RBP13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 TTC19Q6DKK2 380 aaPredicted RBP13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 RTL6Q6ICC9 239 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 MILR1Q7Z6M3 343 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 GALNT12Q8IXK2 581 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 DMRTC2Q8IXT2 367 aaPredicted RBP13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 METTL4Q8N3J2 472 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 ZNF615Q8N8J6 731 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 MNS1Q8NEH6 495 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 C17orf47Q8NEP4 570 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 OR7G1Q8NGA0 311 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 OR4K14Q8NGD5 310 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 DOK4Q8TEW6 326 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 UCN3Q969E3 161 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 FMO2Q99518 471 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 C1QTNF3Q9BXJ4 246 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 MRPL46Q9H2W6 279 aaKnown RBP13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 ELOVL6Q9H5J4 265 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 TEX10Q9NXF1 929 aaPredicted RBP13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 B4GALT7Q9UBV7 327 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 HCFC1P51610 2035 aa13.21□□□□□ -0.29
SNRNP40-203ENST00000463988 CELSR1Q9NYQ6 3014 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 FAM90A27PA6NNH2 459 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 TRIM3O75382 744 aaPredicted RBP13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 OTCP00480 354 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 KLK1P06870 262 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 RFPL3SP0C7P2 107 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 CPMP14384 443 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 POU3F2P20265 443 aaPredicted RBP13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 ENDOUP21128 410 aaKnown RBP13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 SSTR4P31391 388 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 ZFP36L2P47974 494 aaKnown RBP13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 TMED10P49755 219 aaKnown RBP13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 XKP51811 444 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 KRTAP10-9P60411 292 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 RPS6KA2Q15349 733 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 CCNYL2Q5T2Q4 361 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 C1orf185Q5T7R7 199 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 PRAMEF20Q5VT98 475 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 HLA-DQA1Q5Y7H0 255 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 OR4F6Q8NGB9 312 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 OR10Q1Q8NGQ4 319 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 NEIL3Q8TAT5 605 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 ZNF483Q8TF39 744 aaPredicted RBP13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 DCAKDQ8WVC6 231 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 IFT81Q8WYA0 676 aa13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 C16orf45Q96MC5 204 aaPredicted RBP13.2□□□□□ -0.3
SNRNP40-203ENST00000463988 NSUN5Q96P11 429 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms