RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CNOT4O95628 575 aaKnown RBP13.2□□□□□ -0.3
SMC1A-204ENST00000463684 TGFB1P01137 390 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 CPN1P15169 458 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 GGT5P36269 586 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 SLCO1A2P46721 670 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 NRG3P56975 720 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 IRF8Q02556 426 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 GAB1Q13480 694 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 SETDB1Q15047 1291 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 PDK4Q16654 411 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 SPRED3Q2MJR0 410 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 RNASEH2BQ5TBB1 312 aaKnown RBP13.2□□□□□ -0.3
SMC1A-204ENST00000463684 FNDC7Q5VTL7 733 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 PRAMEF9Q5VWM5 478 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 OR4C11Q6IEV9 310 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 SCIMPQ6UWF3 145 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 GPR180Q86V85 440 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 ZNF441Q8N8Z8 693 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 TRIM58Q8NG06 486 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 OR1J4Q8NGS1 313 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 GRK7Q8WTQ7 553 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 SLC44A1Q8WWI5 657 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 WNT2BQ93097 391 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 UBE2E3Q969T4 207 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 TP53INP1Q96A56 240 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 WDR34Q96EX3 536 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 PIK3IP1Q96FE7 263 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 CFAP36Q96G28 342 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 TUBA1CQ9BQE3 449 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 MS4A8Q9BY19 250 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 PHF11Q9UIL8 331 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 CSPG4Q6UVK1 2322 aa13.2□□□□□ -0.3
SMC1A-204ENST00000463684 A8MXE2 369 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 H0Y3Z8 333 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 SAP18O00422 153 aaKnown RBP13.19□□□□□ -0.3
SMC1A-204ENST00000463684 GNB5O14775 395 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 TAPBPO15533 448 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 CTIFO43310 598 aaKnown RBP13.19□□□□□ -0.3
SMC1A-204ENST00000463684 PCNAP12004 261 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 CPOXP36551 454 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 BUD31P41223 144 aaPredicted RBP13.19□□□□□ -0.3
SMC1A-204ENST00000463684 MC3RP41968 323 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 CASP3P42574 277 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 HSPA7P48741 367 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 SRYQ05066 204 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 CHIT1Q13231 466 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 ZNF460Q14592 562 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 MSS51Q4VC12 460 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 TIGD3Q6B0B8 471 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 SULT1C3Q6IMI6 304 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 ENPP6Q6UWR7 440 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 C20orf204Q6ZNR8 217 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 YRDCQ86U90 279 aaKnown RBP13.19□□□□□ -0.3
SMC1A-204ENST00000463684 IGDCC3Q8IVU1 814 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 FAM83FQ8NEG4 500 aaPredicted RBP13.19□□□□□ -0.3
SMC1A-204ENST00000463684 ZNF473Q8WTR7 871 aaKnown RBP13.19□□□□□ -0.3
SMC1A-204ENST00000463684 ANKRD49Q8WVL7 239 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 UCN3Q969E3 161 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 ESAMQ96AP7 390 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 CMTM7Q96FZ5 175 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 TMEM41AQ96HV5 264 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 TMEM79Q9BSE2 394 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 FETUBQ9UGM5 382 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 PACSIN3Q9UKS6 424 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 HIVEP2P31629 2446 aa13.19□□□□□ -0.3
SMC1A-204ENST00000463684 NCKAP5O14513 1909 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 FAM95CA0A1B0GW59 222 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 RNF212BA8MTL3 300 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 CCNT2O60583 730 aaKnown RBP13.18□□□□□ -0.3
SMC1A-204ENST00000463684 GPR75O95800 540 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 KRT15P19012 456 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 CD22P20273 847 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 SOX18P35713 384 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 CASP2P42575 452 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 RAP1GDS1P52306 607 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 TAS2R39P59534 338 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 TNFRSF17Q02223 184 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 PPP1R7Q15435 360 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 TBCCQ15814 346 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 CYP1B1Q16678 543 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 FBXO48Q5FWF7 155 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 CDKL4Q5MAI5 379 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 KHDRBS2Q5VWX1 349 aaKnown RBP13.18□□□□□ -0.3
SMC1A-204ENST00000463684 C18orf63Q68DL7 685 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 MED27Q6P2C8 311 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 TRMT10BQ6PF06 316 aaKnown RBP13.18□□□□□ -0.3
SMC1A-204ENST00000463684 GPSM1Q86YR5 675 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 GCNT2Q8N0V5 402 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 SPC24Q8NBT2 197 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 RGMAQ96B86 450 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 WFIKKN1Q96NZ8 548 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 NAP1L3Q99457 506 aaPredicted RBP13.18□□□□□ -0.3
SMC1A-204ENST00000463684 CENPKQ9BS16 269 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 MED18Q9BUE0 208 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 METTL7AQ9H8H3 244 aa13.18□□□□□ -0.3
SMC1A-204ENST00000463684 COL6A5A8TX70 2615 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 DEFB108AA8MXU0 73 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 SNPHO15079 494 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 CHMP24386 653 aa13.17□□□□□ -0.3
SMC1A-204ENST00000463684 PTPN6P29350 595 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms