RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 OR51B5Q9H339 312 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 FOXD3Q9UJU5 478 aaPredicted RBP18.18■□□□□ 0.5
VARS-221ENST00000463184 ARHGAP21Q5T5U3 1957 aa18.18■□□□□ 0.5
VARS-221ENST00000463184 ANKRD33BA6NCL7 494 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 PROM1O43490 865 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 EPPINO95925 133 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 INHBAP08476 426 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 HOXB4P17483 251 aaPredicted RBP18.17■□□□□ 0.5
VARS-221ENST00000463184 BMP5P22003 454 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 CEACAM8P31997 349 aaPredicted RBP18.17■□□□□ 0.5
VARS-221ENST00000463184 TIMP3P35625 211 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 BUD31P41223 144 aaPredicted RBP18.17■□□□□ 0.5
VARS-221ENST00000463184 RAP1GDS1P52306 607 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 ARFIP1P53367 373 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 RAB10P61026 200 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 TNFRSF17Q02223 184 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 ZKSCAN8Q15776 578 aaPredicted RBP18.17■□□□□ 0.5
VARS-221ENST00000463184 UAP1Q16222 522 aaPredicted RBP18.17■□□□□ 0.5
VARS-221ENST00000463184 NTRK2Q16620 822 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 SPRED3Q2MJR0 410 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 FBXL19-AS1Q494R0 122 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 C18orf63Q68DL7 685 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 EMBQ6PCB8 327 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 RNF111Q6ZNA4 994 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 CAMKMTQ7Z624 323 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 CDC20BQ86Y33 519 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 ZCCHC7Q8N3Z6 543 aaKnown RBP18.17■□□□□ 0.5
VARS-221ENST00000463184 RELL2Q8NC24 303 aaPredicted RBP18.17■□□□□ 0.5
VARS-221ENST00000463184 EXT2Q93063 718 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 RNASE6Q93091 150 aaKnown RBP18.17■□□□□ 0.5
VARS-221ENST00000463184 GAL3ST4Q96RP7 486 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 SH3GL2Q99962 352 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 SORBS1Q9BX66 1292 aaKnown RBP18.17■□□□□ 0.5
VARS-221ENST00000463184 EPB41L4BQ9H329 900 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 NUDT4Q9NZJ9 180 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 ZNF629Q9UEG4 869 aaPredicted RBP18.17■□□□□ 0.5
VARS-221ENST00000463184 CNOT11Q9UKZ1 510 aaKnown RBP18.17■□□□□ 0.5
VARS-221ENST00000463184 RAB21Q9UL25 225 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 PLEKHA6Q9Y2H5 1048 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 IKBKGQ9Y6K9 419 aa18.17■□□□□ 0.5
VARS-221ENST00000463184 NINQ8N4C6 2090 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 NIPBLQ6KC79 2804 aaeCLIP18.16■□□□□ 0.5
VARS-221ENST00000463184 EXOC1LA0A1B0GW35 172 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 OR6C76A6NM76 312 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 K7EPI3 171 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 PIK3CBP42338 1070 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 TRPC1P48995 793 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 SERPINB9P50453 376 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 SLC37A1P57057 533 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 HERVK_113P63132 956 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 ERVK-8P63133 956 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 DUSP8Q13202 625 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 ZNF267Q14586 743 aaPredicted RBP18.16■□□□□ 0.5
VARS-221ENST00000463184 DAZAP2Q15038 168 aaPredicted RBP18.16■□□□□ 0.5
VARS-221ENST00000463184 SF3B4Q15427 424 aaKnown RBP eCLIP18.16■□□□□ 0.54e-10■■■■□ 26.6
VARS-221ENST00000463184 TMEM198Q66K66 360 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 GRHL2Q6ISB3 625 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 TAGAPQ8N103 731 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 NAXEQ8NCW5 288 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 TNIP2Q8NFZ5 429 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 AENQ8WTP8 325 aaKnown RBP18.16■□□□□ 0.5
VARS-221ENST00000463184 UBLCP1Q8WVY7 318 aaPredicted RBP18.16■□□□□ 0.5
VARS-221ENST00000463184 RIT1Q92963 219 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 PAFAH2Q99487 392 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 ERVK-6Q9BXR3 956 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 WWTR1Q9GZV5 400 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 ALG9Q9H6U8 611 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 OPTCQ9UBM4 332 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 ERVK-19Q9WJR5 959 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 TSC22D4Q9Y3Q8 395 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 MAP1AP78559 2803 aaPredicted RBP18.16■□□□□ 0.5
VARS-221ENST00000463184 NAV3Q8IVL0 2385 aa18.16■□□□□ 0.5
VARS-221ENST00000463184 C15orf38-AP3S2A0A0A6YYH1 394 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 CAPN14A8MX76 684 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 POC1B-GALNT4F8VUJ3 575 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 TP53I11O14683 189 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 OR10H2O60403 315 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 TRIM3O75382 744 aaPredicted RBP18.15■□□□□ 0.5
VARS-221ENST00000463184 GPR75O95800 540 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 IL2RAP01589 272 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 FOSL1P15407 271 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 EPB42P16452 691 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 GDF1P27539 372 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 GALNSP34059 522 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 DGKQP52824 942 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 HNRNPH2P55795 449 aaKnown RBP18.15■□□□□ 0.5
VARS-221ENST00000463184 FOXD4Q12950 439 aaPredicted RBP18.15■□□□□ 0.5
VARS-221ENST00000463184 EBPQ15125 230 aaKnown RBP18.15■□□□□ 0.5
VARS-221ENST00000463184 ACSF3Q4G176 576 aaPredicted RBP18.15■□□□□ 0.5
VARS-221ENST00000463184 ISCA2Q86U28 154 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 LACC1Q8IV20 430 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 PM20D2Q8IYS1 436 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 HUS1BQ8NHY5 278 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 UBTD2Q8WUN7 234 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 MBD6Q96DN6 1003 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 ZNF597Q96LX8 424 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 TIMP4Q99727 224 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 ZNF180Q9UJW8 692 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 CBLCQ9ULV8 474 aa18.15■□□□□ 0.5
VARS-221ENST00000463184 NCKAP5O14513 1909 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms