RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PPWD1Q96BP3 646 aaKnown RBP13.42□□□□□ -0.26
COL6A1-202ENST00000463060 ELP4Q96EB1 424 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 PANX1Q96RD7 426 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 CGREF1Q99674 301 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 PELOQ9BRX2 385 aaKnown RBP13.42□□□□□ -0.26
COL6A1-202ENST00000463060 SCNM1Q9BWG6 230 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 GID8Q9NWU2 228 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 MAT2BQ9NZL9 334 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 C3orf18Q9UK00 162 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 PCDHGA6Q9Y5G7 932 aa13.42□□□□□ -0.26
COL6A1-202ENST00000463060 A0A087WV62 115 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 LOC102723996A0A087X1L8 192 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 SYNDIG1LA6NDD5 238 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 C21orf140B9A014 251 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 PLOD3O60568 738 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 ALOX12BO75342 701 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 SLITRK5O94991 958 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 HEXBP07686 556 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 UQCRC2P22695 453 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 SLC6A2P23975 617 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 PTPN4P29074 926 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 NUDT2P50583 147 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 MVDP53602 400 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 SLC25A3Q00325 362 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 HSPB3Q12988 150 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 GAB1Q13480 694 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 C6orf10Q5SRN2 563 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 FAM69BQ5VUD6 431 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 NANOGP8Q6NSW7 305 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 FAM111BQ6SJ93 734 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 ZNF621Q6ZSS3 439 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 LANCL3Q6ZV70 420 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 ASRGL1Q7L266 308 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 ERMP1Q7Z2K6 904 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 ANKRD37Q7Z713 158 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 ADCY4Q8NFM4 1077 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 OR7G2Q8NG99 324 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 OR4A15Q8NGL6 344 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 OR9A2Q8NGT5 310 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 ZFP90Q8TF47 636 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 RBM18Q96H35 190 aaKnown RBP13.41□□□□□ -0.26
COL6A1-202ENST00000463060 ZNF578Q96N58 590 aaPredicted RBP13.41□□□□□ -0.26
COL6A1-202ENST00000463060 ANKRD27Q96NW4 1050 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 HOPXQ9BPY8 73 aaPredicted RBP13.41□□□□□ -0.26
COL6A1-202ENST00000463060 MESP1Q9BRJ9 268 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 GPR87Q9BY21 358 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 NANOGQ9H9S0 305 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 IL1RL2Q9HB29 575 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 NEUROD4Q9HD90 331 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 THSD1Q9NS62 852 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 CROTQ9UKG9 612 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 TCFL5Q9UL49 500 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 PCDHGB4Q9UN71 923 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 MSRB2Q9Y3D2 182 aa13.41□□□□□ -0.26
COL6A1-202ENST00000463060 A0A1W2PQ72 361 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 UPK1AO00322 258 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 PSMG1O95456 288 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 SPINK2P20155 84 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 GPR143P51810 404 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 FUT7Q11130 342 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 ART3Q13508 389 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 DNASE1L3Q13609 305 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 CAPRIN1Q14444 709 aaKnown RBP13.4□□□□□ -0.26
COL6A1-202ENST00000463060 ELAVL1Q15717 326 aaKnown RBP13.4□□□□□ -0.26
COL6A1-202ENST00000463060 TRMT12Q53H54 448 aaKnown RBP13.4□□□□□ -0.26
COL6A1-202ENST00000463060 MFSD4BQ5TF39 518 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 PGAM4Q8N0Y7 254 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 OR2L13Q8N349 312 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 SIMC1Q8NDZ2 872 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 NFAM1Q8NET5 270 aaPredicted RBP13.4□□□□□ -0.26
COL6A1-202ENST00000463060 KAT2AQ92830 837 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 NXPE2Q96DL1 559 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 FAM120BQ96EK7 910 aaKnown RBP13.4□□□□□ -0.26
COL6A1-202ENST00000463060 DGAT2Q96PD7 388 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 WDR77Q9BQA1 342 aaPredicted RBP13.4□□□□□ -0.26
COL6A1-202ENST00000463060 CPPED1Q9BRF8 314 aaPredicted RBP13.4□□□□□ -0.26
COL6A1-202ENST00000463060 SLC39A3Q9BRY0 314 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 BTBD10Q9BSF8 475 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 CRB3Q9BUF7 120 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 IKZF5Q9H5V7 419 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 ADAP2Q9NPF8 381 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 SEMA3GQ9NS98 782 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 GPATCH2Q9NW75 528 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 PTGFRNQ9P2B2 879 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 VPS4AQ9UN37 437 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 PPIEQ9UNP9 301 aaKnown RBP13.4□□□□□ -0.26
COL6A1-202ENST00000463060 C19orf53Q9UNZ5 99 aaPredicted RBP13.4□□□□□ -0.26
COL6A1-202ENST00000463060 PTRH2Q9Y3E5 179 aaKnown RBP13.4□□□□□ -0.26
COL6A1-202ENST00000463060 AKAP13Q12802 2813 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 SPTBN2O15020 2390 aa13.4□□□□□ -0.26
COL6A1-202ENST00000463060 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 HRKO00198 91 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 PCDH17O14917 1159 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 DDAH2O95865 285 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 CLPSP04118 112 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 IGKV3-11P04433 115 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 ABCB1P08183 1280 aaPredicted RBP13.39□□□□□ -0.27
COL6A1-202ENST00000463060 GPX2P18283 190 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 NT5EP21589 574 aa13.39□□□□□ -0.27
COL6A1-202ENST00000463060 MMP11P24347 488 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms