RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 SLC37A1P57057 533 aa7□□□□□ -1.29
SMC3-202ENST00000462899 SNX1Q13596 522 aa7□□□□□ -1.29
SMC3-202ENST00000462899 EBPQ15125 230 aaKnown RBP7□□□□□ -1.29
SMC3-202ENST00000462899 RBBP5Q15291 538 aaKnown RBP7□□□□□ -1.29
SMC3-202ENST00000462899 RPS6KA2Q15349 733 aa7□□□□□ -1.29
SMC3-202ENST00000462899 SPA17Q15506 151 aa7□□□□□ -1.29
SMC3-202ENST00000462899 KCTD19Q17RG1 926 aaPredicted RBP7□□□□□ -1.29
SMC3-202ENST00000462899 RBM20Q5T481 1227 aaKnown RBP7□□□□□ -1.29
SMC3-202ENST00000462899 PRAMEF9Q5VWM5 478 aa7□□□□□ -1.29
SMC3-202ENST00000462899 ANKRD22Q5VYY1 191 aa7□□□□□ -1.29
SMC3-202ENST00000462899 ADNP2Q6IQ32 1131 aa7□□□□□ -1.29
SMC3-202ENST00000462899 ZNF474Q6S9Z5 364 aaPredicted RBP7□□□□□ -1.29
SMC3-202ENST00000462899 PLXDC2Q6UX71 529 aa7□□□□□ -1.29
SMC3-202ENST00000462899 C4orf22Q6V702 233 aa7□□□□□ -1.29
SMC3-202ENST00000462899 LINC00114Q6XXX2 140 aa7□□□□□ -1.29
SMC3-202ENST00000462899 UBE3DQ7Z6J8 389 aa7□□□□□ -1.29
SMC3-202ENST00000462899 THOC6Q86W42 341 aaKnown RBP7□□□□□ -1.29
SMC3-202ENST00000462899 MYO1HQ8N1T3 1032 aa7□□□□□ -1.29
SMC3-202ENST00000462899 GPATCH11Q8N954 259 aa7□□□□□ -1.29
SMC3-202ENST00000462899 C2CD4AQ8NCU7 369 aaPredicted RBP7□□□□□ -1.29
SMC3-202ENST00000462899 TTLQ8NG68 377 aa7□□□□□ -1.29
SMC3-202ENST00000462899 ATL1Q8WXF7 558 aa7□□□□□ -1.29
SMC3-202ENST00000462899 ABTB1Q969K4 478 aaPredicted RBP7□□□□□ -1.29
SMC3-202ENST00000462899 LINGO1Q96FE5 620 aa7□□□□□ -1.29
SMC3-202ENST00000462899 TMEM41AQ96HV5 264 aa7□□□□□ -1.29
SMC3-202ENST00000462899 FBXL20Q96IG2 436 aa7□□□□□ -1.29
SMC3-202ENST00000462899 FAR2Q96K12 515 aa7□□□□□ -1.29
SMC3-202ENST00000462899 JSRP1Q96MG2 331 aaPredicted RBP7□□□□□ -1.29
SMC3-202ENST00000462899 RILPQ96NA2 401 aa7□□□□□ -1.29
SMC3-202ENST00000462899 GNRHR2Q96P88 292 aa7□□□□□ -1.29
SMC3-202ENST00000462899 NDNQ99608 321 aa7□□□□□ -1.29
SMC3-202ENST00000462899 TM9SF2Q99805 663 aa7□□□□□ -1.29
SMC3-202ENST00000462899 MAPKAP1Q9BPZ7 522 aa7□□□□□ -1.29
SMC3-202ENST00000462899 ANGPTL4Q9BY76 406 aa7□□□□□ -1.29
SMC3-202ENST00000462899 REXO4Q9GZR2 422 aaKnown RBP7□□□□□ -1.29
SMC3-202ENST00000462899 WWTR1Q9GZV5 400 aa7□□□□□ -1.29
SMC3-202ENST00000462899 NT5DC2Q9H857 520 aa7□□□□□ -1.29
SMC3-202ENST00000462899 LYRM4Q9HD34 91 aa7□□□□□ -1.29
SMC3-202ENST00000462899 HOMER3Q9NSC5 361 aa7□□□□□ -1.29
SMC3-202ENST00000462899 KLHL28Q9NXS3 571 aa7□□□□□ -1.29
SMC3-202ENST00000462899 COPS7AQ9UBW8 275 aa7□□□□□ -1.29
SMC3-202ENST00000462899 PACSIN3Q9UKS6 424 aa7□□□□□ -1.29
SMC3-202ENST00000462899 FBXO5Q9UKT4 447 aa7□□□□□ -1.29
SMC3-202ENST00000462899 SLC22A14Q9Y267 594 aa7□□□□□ -1.29
SMC3-202ENST00000462899 DTX4Q9Y2E6 619 aa7□□□□□ -1.29
SMC3-202ENST00000462899 EPN1Q9Y6I3 576 aaPredicted RBP7□□□□□ -1.29
SMC3-202ENST00000462899 FREM1Q5H8C1 2179 aa7□□□□□ -1.29
SMC3-202ENST00000462899 OVOL3O00110 214 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 ACTL6AO96019 429 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 HIST1H2AGP0C0S8 130 aaPredicted RBP6.99□□□□□ -1.29
SMC3-202ENST00000462899 FAM157CP0CG43 387 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 MLNP12872 115 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 HIST1H2ADP20671 130 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 SAT1P21673 171 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 SERPINB3P29508 390 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 UGT2B10P36537 528 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 CD79BP40259 229 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 RPL21P46778 160 aaKnown RBP6.99□□□□□ -1.29
SMC3-202ENST00000462899 SLC6A12P48065 614 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 PGGT1BP53609 377 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 PLA2G16P53816 162 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 NR1H2P55055 460 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 GFRA1P56159 465 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 ID2Q02363 134 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 PLAURQ03405 335 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 FUT7Q11130 342 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 STX4Q12846 297 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 RCAN2Q14206 197 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 CCNG2Q16589 344 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 SPRED3Q2MJR0 410 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 WIPI1Q5MNZ9 446 aaPredicted RBP6.99□□□□□ -1.29
SMC3-202ENST00000462899 TMEM81Q6P7N7 255 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 TRIM40Q6P9F5 258 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 TMIGD1Q6UXZ0 262 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 RAD9BQ6WBX8 426 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 PLEKHM3Q6ZWE6 761 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 KIAA1328Q86T90 577 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 CNTN4Q8IWV2 1026 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 GCNT2Q8N0V5 402 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 BBOF1Q8ND07 529 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 FAM13CQ8NE31 585 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 FAM83FQ8NEG4 500 aaPredicted RBP6.99□□□□□ -1.29
SMC3-202ENST00000462899 SPPL2AQ8TCT8 520 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 INTS12Q96CB8 462 aaKnown RBP6.99□□□□□ -1.29
SMC3-202ENST00000462899 STARD4Q96DR4 205 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 HIST1H2AHQ96KK5 128 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 RUNDC3BQ96NL0 473 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 HIST1H2AJQ99878 128 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 TMEM204Q9BSN7 226 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 H2AFJQ9BTM1 129 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 TSGA10Q9BZW7 698 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 ACBD3Q9H3P7 528 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 ZNF226Q9NYT6 803 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 TAS2R13Q9NYV9 303 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 CAPN6Q9Y6Q1 641 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 ALPK2Q86TB3 2170 aa6.99□□□□□ -1.29
SMC3-202ENST00000462899 A0A088AWK7 358 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 J3QW42 95 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 KLF4O43474 513 aa6.98□□□□□ -1.29
SMC3-202ENST00000462899 ICMTO60725 284 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms