RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 CACNA1BQ00975 2339 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 TRBV11-1A0A0K0K1C0 115 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 IGKV3-11P04433 115 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 LAMP1P11279 417 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 DDX5P17844 614 aaKnown RBP10.98□□□□□ -0.65
CPNE1-221ENST00000462352 SOX18P35713 384 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 FRKP42685 505 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-221ENST00000462352 CLCN2P51788 898 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 NCBP2P52298 156 aaKnown RBP eCLIP10.98□□□□□ -0.65
CPNE1-221ENST00000462352 ARFIP2P53365 341 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 SEC24CP53992 1094 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 CLNS1AP54105 237 aaKnown RBP10.98□□□□□ -0.65
CPNE1-221ENST00000462352 UFM1P61960 85 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 GNGT1P63211 74 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 MGAT2Q10469 447 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 MAP4K2Q12851 820 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 MYBPC3Q14896 1274 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 RPS6KA2Q15349 733 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 PDCD4Q53EL6 469 aaKnown RBP10.98□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF628Q5EBL2 1059 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 CPTPQ5TA50 214 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 C6orf163Q5TEZ5 329 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 IRAK1BP1Q5VVH5 260 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 FAM111BQ6SJ93 734 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 CAMKMTQ7Z624 323 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 SIRT6Q8N6T7 355 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 ADCY4Q8NFM4 1077 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 OR9A2Q8NGT5 310 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF675Q8TD23 568 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 BRIX1Q8TDN6 353 aaKnown RBP10.98□□□□□ -0.65
CPNE1-221ENST00000462352 COQ8BQ96D53 544 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 FBXL20Q96IG2 436 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 TEX37Q96LM6 180 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 RILPQ96NA2 401 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 AMDHD1Q96NU7 426 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 PRPF18Q99633 342 aaKnown RBP10.98□□□□□ -0.65
CPNE1-221ENST00000462352 NUDT9Q9BW91 350 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 SEMA4CQ9C0C4 833 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 GLIPR2Q9H4G4 154 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF552Q9H707 407 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-221ENST00000462352 SDR39U1Q9NRG7 319 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-221ENST00000462352 ATAD3AQ9NVI7 634 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 GPR83Q9NYM4 423 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 COPS7AQ9UBW8 275 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 LHX6Q9UPM6 363 aa10.98□□□□□ -0.65
CPNE1-221ENST00000462352 A8MUI8 341 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 MKRN2OSH3BPM6 223 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 ERVH48-1M5A8F1 160 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 SLC22A3O75751 556 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 CLPSP04118 112 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 FAM87AP0C7U9 286 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 S1PR1P21453 382 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 IL12AP29459 219 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 SSTR4P31391 388 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 SOX11P35716 441 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 MRPS35P82673 323 aaKnown RBP10.97□□□□□ -0.65
CPNE1-221ENST00000462352 FUT7Q11130 342 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 KCNAB2Q13303 367 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 PGS1Q32NB8 556 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 TRMT12Q53H54 448 aaKnown RBP10.97□□□□□ -0.65
CPNE1-221ENST00000462352 AGAP7PQ5VUJ5 663 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 OR4F3Q6IEY1 312 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 H3F3CQ6NXT2 135 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF551Q7Z340 670 aaPredicted RBP10.97□□□□□ -0.65
CPNE1-221ENST00000462352 MIER2Q8N344 545 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 VWA5B2Q8N398 1253 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 NATD1Q8N6N6 113 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 KAT2AQ92830 837 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 TESCQ96BS2 214 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 CTHRC1Q96CG8 243 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 ZBED6CLQ96FA7 236 aaPredicted RBP10.97□□□□□ -0.65
CPNE1-221ENST00000462352 ABHD17AQ96GS6 310 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 AGAP4Q96P64 663 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 SLC25A23Q9BV35 468 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 DUSP26Q9BV47 211 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 DEFB126Q9BYW3 111 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 BHLHE41Q9C0J9 482 aaPredicted RBP10.97□□□□□ -0.65
CPNE1-221ENST00000462352 CLMPQ9H6B4 373 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 ACSS1Q9NUB1 689 aaPredicted RBP10.97□□□□□ -0.65
CPNE1-221ENST00000462352 ZIM2Q9NZV7 527 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 PTGFRNQ9P2B2 879 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 KLHL14Q9P2G3 628 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 ZNF639Q9UID6 485 aa10.97□□□□□ -0.65
CPNE1-221ENST00000462352 PCDHGA9Q9Y5G4 932 aaKnown RBP10.97□□□□□ -0.65
CPNE1-221ENST00000462352 CROCCQ5TZA2 2017 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 A0A1W2PRB8 838 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 GMNCA6NCL1 334 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 C9JVG2 144 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 PRKNO60260 465 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-221ENST00000462352 ZFAND5O76080 213 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 SLITRK5O94991 958 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 CBX7O95931 251 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 NCF2P19878 526 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-221ENST00000462352 EFNA1P20827 205 aaPredicted RBP10.96□□□□□ -0.65
CPNE1-221ENST00000462352 GPX3P22352 226 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 MRPL19P49406 292 aaKnown RBP10.96□□□□□ -0.65
CPNE1-221ENST00000462352 MANFP55145 182 aaKnown RBP10.96□□□□□ -0.65
CPNE1-221ENST00000462352 SLC37A1P57057 533 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 STX1BP61266 288 aa10.96□□□□□ -0.65
CPNE1-221ENST00000462352 RNF4P78317 190 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms