RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 FKBP3Q00688 224 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 LOXL1Q08397 574 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 PRKG2Q13237 762 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 DPYSQ14117 519 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 IHHQ14623 411 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 ICAM4Q14773 271 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 KIR2DS3Q14952 304 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 SF3B4Q15427 424 aaKnown RBP eCLIP3.67□□□□□ -1.821e-9■■■■■ 43.2
ECHDC1-211ENST00000460558 TBRG1Q3YBR2 411 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 ATP13A5Q4VNC0 1218 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 C2CD6Q53TS8 623 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 AWAT1Q58HT5 328 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 WASHC2DQ5SRD0 308 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 LDLRAP1Q5SW96 308 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 DEPDC1Q5TB30 811 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 NDUFAF5Q5TEU4 345 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 MFSD4BQ5TF39 518 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 SLC9A4Q6AI14 798 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 MZT2BQ6NZ67 158 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 FAM180BQ6P0A1 224 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 LCNL1Q6ZST4 164 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 LANCL3Q6ZV70 420 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 LNX2Q8N448 690 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 NPWQ8N729 165 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 ZNF611Q8N823 705 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 SEMA6DQ8NFY4 1073 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 FLVCR1-AS1Q8TAF5 88 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 FAM216AQ8WUB2 273 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 KTI12Q96EK9 354 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 CAPZA3Q96KX2 299 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 HS6ST2Q96MM7 605 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 ZNF285Q96NJ3 590 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 USP28Q96RU2 1077 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 LPAR4Q99677 370 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 NRTNQ99748 197 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 TSG101Q99816 390 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 PIGQQ9BRB3 760 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 MED18Q9BUE0 208 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 ADGRE3Q9BY15 652 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 ALOXE3Q9BYJ1 711 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 TTTY12Q9BZ98 90 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 POLR1EQ9GZS1 481 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 NT5MQ9NPB1 228 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 HAUS2Q9NVX0 235 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 OR6C2Q9NZP2 312 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 STEAP1Q9UHE8 339 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 FZD10Q9ULW2 581 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 ICKQ9UPZ9 632 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 SH2B3Q9UQQ2 575 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 LAMP3Q9UQV4 416 aa3.67□□□□□ -1.82
ECHDC1-211ENST00000460558 EPPK1P58107 5090 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 EXPH5Q8NEV8 1989 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 IGHV4-30-2A0A087WSY4 118 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 A0A096LNT2 108 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 TRGV5A0A0B4J1U4 118 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 LOC100653049A0A140TA62 436 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 FAM170AA1A519 330 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 SAC3D1A6NKF1 404 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 TRIM77I1YAP6 450 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 OVOL3O00110 214 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 HS3ST1O14792 307 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 MATN3O15232 486 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 PIN1P1O15428 100 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 UGT1A9O60656 530 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 KRT34O76011 436 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 TJP3O95049 919 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 LSM8O95777 96 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 PEX11BO96011 259 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 IGHV4-39P01824 125 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 IGHV4-31P0DP07 118 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 ATP1A3P13637 1013 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 PPP3CBP16298 524 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 ERCC2P18074 760 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 MSH3P20585 1137 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 SRP14P37108 136 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 SLC26A3P40879 764 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 GRIA3P42263 894 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 MAGEA5P43359 124 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 CD151P48509 253 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 ACTN3Q08043 901 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 SF3A3Q12874 501 aaKnown RBP eCLIP3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 SLC10A1Q14973 349 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 CA9Q16790 459 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 ACSF3Q4G176 576 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 VAX1Q5SQQ9 334 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 FAM173BQ6P4H8 233 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 ZNF449Q6P9G9 518 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 PAPD4Q6PIY7 484 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 CLEC2AQ6UVW9 174 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 ZNF704Q6ZNC4 412 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 MAVSQ7Z434 540 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 MDGA2Q7Z553 956 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 LUZP2Q86TE4 346 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 SLC26A11Q86WA9 606 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 CFAP206Q8IYR0 622 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 ATPAF2Q8N5M1 289 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 TMEM156Q8N614 296 aa3.66□□□□□ -1.82
ECHDC1-211ENST00000460558 AMER3Q8N944 861 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms