RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 ITM2AO43736 263 aa9.96□□□□□ -0.82
UBR4-208ENST00000459947 IGKV3-11P04433 115 aa9.96□□□□□ -0.82
UBR4-208ENST00000459947 SDC1P18827 310 aa9.96□□□□□ -0.82
UBR4-208ENST00000459947 CYB561P49447 251 aa9.96□□□□□ -0.82
UBR4-208ENST00000459947 EFNA3P52797 238 aa9.96□□□□□ -0.82
UBR4-208ENST00000459947 NFATC3Q12968 1075 aa9.96□□□□□ -0.82
UBR4-208ENST00000459947 PDCD2Q16342 344 aaPredicted RBP9.96□□□□□ -0.82
UBR4-208ENST00000459947 ANXA8L1Q5VT79 327 aa9.96□□□□□ -0.82
UBR4-208ENST00000459947 ATCAYQ86WG3 371 aa9.96□□□□□ -0.82
UBR4-208ENST00000459947 ZNF721Q8TF20 911 aa9.96□□□□□ -0.82
UBR4-208ENST00000459947 CKAP2Q8WWK9 683 aa9.96□□□□□ -0.82
UBR4-208ENST00000459947 CCDC28BQ9BUN5 200 aa9.96□□□□□ -0.82
UBR4-208ENST00000459947 CDCP1Q9H5V8 836 aa9.96□□□□□ -0.82
UBR4-208ENST00000459947 PGRMC2O15173 223 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 BCKDHAP12694 445 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 RNF4P78317 190 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 SRSF11Q05519 484 aaKnown RBP9.95□□□□□ -0.82
UBR4-208ENST00000459947 GSTA3Q16772 222 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 TBCELQ5QJ74 424 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 RTL4Q6ZR62 310 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 TICAM1Q8IUC6 712 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 GOLM1Q8NBJ4 401 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 GLB1L3Q8NCI6 653 aaPredicted RBP9.95□□□□□ -0.82
UBR4-208ENST00000459947 EXOSC8Q96B26 276 aaKnown RBP9.95□□□□□ -0.82
UBR4-208ENST00000459947 SECISBP2Q96T21 854 aaKnown RBP9.95□□□□□ -0.82
UBR4-208ENST00000459947 BHLHE41Q9C0J9 482 aaPredicted RBP9.95□□□□□ -0.82
UBR4-208ENST00000459947 CHD8Q9HCK8 2581 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 TGFBR3LH3BV60 316 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 PLOD2O00469 737 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 TP53I11O14683 189 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 SCAMP2O15127 329 aaKnown RBP9.95□□□□□ -0.82
UBR4-208ENST00000459947 PLOD3O60568 738 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 GBAP04062 536 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 CLDN8P56748 225 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 FOXL2P58012 376 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 ZCCHC12Q6PEW1 402 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 BHLHB9Q6PI77 547 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 CAMKMTQ7Z624 323 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 SIRT6Q8N6T7 355 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 ZNF681Q96N22 645 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 BRINP2Q9C0B6 783 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 NEUROD4Q9HD90 331 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 TNFRSF12AQ9NP84 129 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 ZNF71Q9NQZ8 489 aaPredicted RBP9.95□□□□□ -0.82
UBR4-208ENST00000459947 ERVK-19Q9WJR5 959 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 CPAMD8Q8IZJ3 1885 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 USP24Q9UPU5 2620 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 ID2Q02363 134 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 ZNHIT3Q15649 155 aaPredicted RBP9.95□□□□□ -0.82
UBR4-208ENST00000459947 PIGGQ5H8A4 983 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 IL23RQ5VWK5 629 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 SLC6A19Q695T7 634 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 LINC00696Q6ZRV3 163 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 RBMXL3Q8N7X1 1067 aaKnown RBP9.95□□□□□ -0.82
UBR4-208ENST00000459947 OR2T11Q8NH01 316 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 DPY30Q9C005 99 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 DMDP11532 3685 aa9.95□□□□□ -0.82
UBR4-208ENST00000459947 A8MVJ9 347 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 TMEM233B4DJY2 109 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 PEX11AO75192 247 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 LCN1P31025 176 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 CPTPQ5TA50 214 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 MSANTD1Q6ZTZ1 278 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 OR4N5Q8IXE1 308 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 BEST3Q8N1M1 668 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 LIX1Q8N485 282 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 AGR3Q8TD06 166 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 SFXN5Q8TD22 340 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 OR5P2Q8WZ92 322 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 HPF1Q9NWY4 346 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 MAT2BQ9NZL9 334 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 MYOTQ9UBF9 498 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 HEY2Q9UBP5 337 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 ZNF639Q9UID6 485 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 PCDHGA10Q9Y5H3 936 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 SCN2AQ99250 2005 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 SUV39H1O43463 412 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 ABCB7O75027 752 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 IDO1P14902 403 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 MAGEA8P43361 318 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 TNFSF10P50591 281 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 STX1BP61266 288 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 RPS6KA2Q15349 733 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 PRICKLE4Q2TBC4 344 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 FAM180AQ6UWF9 173 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 ZNF843Q8N446 348 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 OR10A5Q9H207 317 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 TAS2R9Q9NYW1 312 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 GLOD5A6NK44 160 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 WASHC1A8K0Z3 465 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 SORBS2O94875 1100 aaKnown RBP9.94□□□□□ -0.82
UBR4-208ENST00000459947 MRPL19P49406 292 aaKnown RBP9.94□□□□□ -0.82
UBR4-208ENST00000459947 NCBP2P52298 156 aaKnown RBP eCLIP9.94□□□□□ -0.82
UBR4-208ENST00000459947 OC90Q02509 493 aaPredicted RBP9.94□□□□□ -0.82
UBR4-208ENST00000459947 TUBA3CQ13748 450 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 VPS26BQ4G0F5 336 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 ZNF628Q5EBL2 1059 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 SLC25A25Q6KCM7 469 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 TUBA3EQ6PEY2 450 aa9.94□□□□□ -0.82
UBR4-208ENST00000459947 TSSK3Q96PN8 268 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms