RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 ISYNA1Q9NPH2 558 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 NIT2Q9NQR4 276 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 TMEM14AQ9Y6G1 99 aa4.79□□□□□ -1.64
PCDH9-203ENST00000456367 RIMS1Q86UR5 1692 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 LRRC37A3O60309 1634 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 MYH1P12882 1939 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 MYH2Q9UKX2 1941 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 MYH4Q9Y623 1939 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 GGT3PA6NGU5 568 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 NPC1O15118 1278 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 P2RX6O15547 441 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 TLR5O60602 858 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 FMO6PO60774 539 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 TSPAN12O95859 305 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 INHAP05111 366 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 SLC35G4P0C7Q5 338 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 THEGLP0DJG4 465 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ETFAP13804 333 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 OR12D2P58182 307 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 LILRA4P59901 499 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ARHGAP1Q07960 439 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 SLC10A2Q12908 348 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 HSPB3Q12988 150 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CBX2Q14781 532 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ARL6IP1Q15041 203 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 C14orf28Q4W4Y0 310 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CLEC12AQ5QGZ9 265 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 HBMQ6B0K9 141 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 SFRP4Q6FHJ7 346 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 C16orf59Q7L2K0 433 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 SLC9B2Q86UD5 537 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 POGLUT1Q8NBL1 392 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 FBXO22Q8NEZ5 403 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 OR10K1Q8NGX5 313 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 OR6F1Q8NGZ6 308 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 GRIN3AQ8TCU5 1115 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ELP5Q8TE02 316 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 PHYHIPQ92561 330 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 MARVELD3Q96A59 401 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 COL26A1Q96A83 441 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 FUBP3Q96I24 572 aaKnown RBP eCLIP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 HDHD5Q9BXW7 423 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 C8orf33Q9H7E9 229 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 METTL17Q9H7H0 456 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 RPS10P5Q9NQ39 176 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ASB6Q9NWX5 421 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 GMEB2Q9UKD1 530 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 ASF1AQ9Y294 204 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 OR10H1Q9Y4A9 318 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 MYH11P35749 1972 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 C2orf92A0A1B0GVN3 265 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 A0A1W2PQH9 124 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 OR51F1A6NGY5 319 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 E7EQ34 232 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 GTPBP1O00178 669 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 GOSR2O14653 212 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 OR10H2O60403 315 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 UGDHO60701 494 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 TMEM127O75204 238 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 TCRBP04435 133 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CLUP10909 449 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 JUPP14923 745 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 GIFP27352 417 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 RPL10P27635 214 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 PSEN2P49810 448 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 S100A10P60903 97 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 STXBP1P61764 594 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 RASGEF1BQ0VAM2 473 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 MEF2DQ14814 521 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 SMUG1Q53HV7 270 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 PAN3Q58A45 887 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 PLEKHS1Q5SXH7 462 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 LPCAT3Q6P1A2 487 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 SMARCD3Q6STE5 483 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 USP51Q70EK9 711 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 KLBQ86Z14 1044 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 SKA3Q8IX90 412 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 DNAJC5GQ8N7S2 189 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 OR51G2Q8NGK0 314 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 DNASE1L2Q92874 299 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 RGMAQ96B86 450 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 PLD4Q96BZ4 506 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 POM121Q96HA1 1249 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 HS6ST2Q96MM7 605 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 AP1S3Q96PC3 154 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 MTERF1Q99551 399 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 TBX5Q99593 518 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CENPOQ9BU64 300 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 TRAF4Q9BUZ4 470 aaPredicted RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 RAB11FIP5Q9BXF6 653 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 SMOC2Q9H3U7 446 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 DPEP2Q9H4A9 486 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 NSUN3Q9H649 340 aaKnown RBP4.78□□□□□ -1.64
PCDH9-203ENST00000456367 NOX3Q9HBY0 568 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 TRDV1A0A1B0GX56 115 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 MEGF11A6BM72 1044 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 OR6C74A6NCV1 312 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 CD8B2A6NJW9 211 aa4.78□□□□□ -1.64
PCDH9-203ENST00000456367 B4DXG7 233 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms