RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TRMUO75648 421 aaKnown RBP12.89□□□□□ -0.35
CLK3-203ENST00000454830 ISL1P61371 349 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 SLC48A1Q6P1K1 146 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 AHSA2Q719I0 299 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 EPYCQ99645 322 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 EPS8L2Q9H6S3 715 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 USP36Q9P275 1121 aaKnown RBP12.89□□□□□ -0.35
CLK3-203ENST00000454830 SPTY2D1-AS1A0A0U1RR47 76 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 H3BN98 237 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 LDB3O75112 727 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 CHRNB1P11230 501 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 FUT4P22083 530 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 PCSK6P29122 969 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 KCNC4Q03721 635 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 FZD2Q14332 565 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 SLC30A8Q8IWU4 369 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 NLGN4XQ8N0W4 816 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 NIPSNAP1Q9BPW8 284 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 LYARQ9NX58 379 aaKnown RBP12.89□□□□□ -0.35
CLK3-203ENST00000454830 PTTG2Q9NZH5 202 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 DUSP12Q9UNI6 340 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 TPRKBQ9Y3C4 175 aa12.89□□□□□ -0.35
CLK3-203ENST00000454830 FANCMQ8IYD8 2048 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 PROM1O43490 865 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 FHP07954 510 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 TFPTP0C1Z6 253 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 GLULP15104 373 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 ALOX12P18054 663 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 NT5EP21589 574 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 SLC5A2P31639 672 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 BMP8BP34820 402 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 NUDT6P53370 316 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 SNRPNP63162 240 aaKnown RBP12.88□□□□□ -0.35
CLK3-203ENST00000454830 RPL6Q02878 288 aaKnown RBP12.88□□□□□ -0.35
CLK3-203ENST00000454830 ADPRMQ3LIE5 342 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 ABHD13Q7L211 337 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 PRSS41Q7RTY9 318 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 ABI3BPQ7Z7G0 1075 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 PARGQ86W56 976 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 ZNF655Q8N720 491 aaPredicted RBP12.88□□□□□ -0.35
CLK3-203ENST00000454830 NAA50Q9GZZ1 169 aaKnown RBP12.88□□□□□ -0.35
CLK3-203ENST00000454830 SERHL2Q9H4I8 314 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 DNAAF2Q9NVR5 837 aaKnown RBP12.88□□□□□ -0.35
CLK3-203ENST00000454830 HEMK1Q9Y5R4 338 aaPredicted RBP12.88□□□□□ -0.35
CLK3-203ENST00000454830 SYNDIG1LA6NDD5 238 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 ABCB7O75027 752 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 DNAJB6O75190 326 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 JRKO75564 520 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 FADS2O95864 444 aaKnown RBP12.88□□□□□ -0.35
CLK3-203ENST00000454830 ANXA8P13928 327 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 PSMB9P28065 219 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 GSTM2P28161 218 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 GSTM5P46439 218 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 RNF144AP50876 292 aaPredicted RBP12.88□□□□□ -0.35
CLK3-203ENST00000454830 EEF1A2Q05639 463 aaKnown RBP12.88□□□□□ -0.35
CLK3-203ENST00000454830 TOP3AQ13472 1001 aaPredicted RBP12.88□□□□□ -0.35
CLK3-203ENST00000454830 OR4K14Q8NGD5 310 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 OR5T3Q8NGG3 340 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 POT1Q9NUX5 634 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 PCOLCE2Q9UKZ9 415 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 MRPS2Q9Y399 296 aaKnown RBP12.88□□□□□ -0.35
CLK3-203ENST00000454830 A0A1W2PPC4 97 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 PRAMEF25A6NGN4 478 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 FRS3O43559 492 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 SOX14O95416 240 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 SEMG1P04279 462 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 SHC2P98077 582 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 PIN1Q13526 163 aaPredicted RBP12.88□□□□□ -0.35
CLK3-203ENST00000454830 PTCRAQ6ISU1 281 aaPredicted RBP12.88□□□□□ -0.35
CLK3-203ENST00000454830 SYT13Q7L8C5 426 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 CSNK1A1LQ8N752 337 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 C12orf43Q96C57 262 aaKnown RBP12.88□□□□□ -0.35
CLK3-203ENST00000454830 ISOC1Q96CN7 298 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 CSF3RQ99062 836 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 ERVK-18Q9QC07 812 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 SLC9A8Q9Y2E8 581 aa12.88□□□□□ -0.35
CLK3-203ENST00000454830 OR2A25A4D2G3 310 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 SLC16A6O15403 523 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 EMC8O43402 210 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 RHCEP18577 417 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 PCBP3P57721 371 aaKnown RBP12.87□□□□□ -0.35
CLK3-203ENST00000454830 MICAQ29983 383 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 DCST1Q5T197 706 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 TMEM236Q5W0B7 351 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 TSEN54Q7Z6J9 526 aaKnown RBP12.87□□□□□ -0.35
CLK3-203ENST00000454830 OR56A1Q8NGH5 318 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 OR2A5Q96R48 311 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 SLC38A3Q99624 504 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 RHNO1Q9BSD3 238 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 FNDC11Q9BVV2 318 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 RBM38Q9H0Z9 239 aaKnown RBP12.87□□□□□ -0.35
CLK3-203ENST00000454830 A4GALTQ9NPC4 353 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 SOHLH2Q9NX45 425 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 PHF11Q9UIL8 331 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 MRPS17Q9Y2R5 130 aaKnown RBP12.87□□□□□ -0.35
CLK3-203ENST00000454830 KCNE3Q9Y6H6 103 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 TMEM229AB2RXF0 380 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 UGT2B17O75795 530 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 ITGAMP11215 1152 aa12.87□□□□□ -0.35
CLK3-203ENST00000454830 CTSKP43235 329 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms