RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 A8MUA0 341 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 NME4O00746 187 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 KCNH1O95259 989 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 KRT16P08779 473 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 HBQ1P09105 142 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 ZGLP1P0C6A0 271 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 PCSK2P16519 638 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 CSNK2A2P19784 350 aaPredicted RBP10.28□□□□□ -0.76
SCN9A-205ENST00000454569 SPINK2P20155 84 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 SLC5A2P31639 672 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 MVDP53602 400 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 RAB15P59190 212 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 GABREP78334 506 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 IGLV3-21P80748 117 aaPredicted RBP10.28□□□□□ -0.76
SCN9A-205ENST00000454569 DUSP8Q13202 625 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 CEACAM7Q14002 265 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 TRMT5Q32P41 509 aaKnown RBP10.28□□□□□ -0.76
SCN9A-205ENST00000454569 MINDY4Q4G0A6 757 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 TRMT12Q53H54 448 aaKnown RBP10.28□□□□□ -0.76
SCN9A-205ENST00000454569 MFSD4BQ5TF39 518 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 ANXA8L1Q5VT79 327 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 NIPAL1Q6NVV3 410 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 HACD2Q6Y1H2 254 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 MSANTD1Q6ZTZ1 278 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 MED25Q71SY5 747 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 SLC15A3Q8IY34 581 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 CACTIN-AS1Q8N1I8 211 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 FAM156AQ8NDB6 213 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 OR7G2Q8NG99 324 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 PNPT1Q8TCS8 783 aaKnown RBP10.28□□□□□ -0.76
SCN9A-205ENST00000454569 ZFP90Q8TF47 636 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 OR5P2Q8WZ92 322 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 MR1Q95460 341 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 TMEM125Q96AQ2 219 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 MCUR1Q96AQ8 359 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 MAGED4Q96JG8 741 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 LRFN5Q96NI6 719 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 PTCHD1Q96NR3 888 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 ANKRD27Q96NW4 1050 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 CDRT15Q96T59 188 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 CGREF1Q99674 301 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 C1orf21Q9H246 121 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 PIF1Q9H611 641 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 EPS8L2Q9H6S3 715 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 MKKSQ9NPJ1 570 aaPredicted RBP10.28□□□□□ -0.76
SCN9A-205ENST00000454569 TAS2R9Q9NYW1 312 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 IFT80Q9P2H3 777 aaPredicted RBP10.28□□□□□ -0.76
SCN9A-205ENST00000454569 ZNF282Q9UDV7 671 aaPredicted RBP10.28□□□□□ -0.76
SCN9A-205ENST00000454569 MKL2Q9ULH7 1088 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 MAPRE3Q9UPY8 281 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 PCDHGA3Q9Y5H0 932 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 SPACA6W5XKT8 324 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 MED13Q9UHV7 2174 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 FRYQ5TBA9 3013 aa10.28□□□□□ -0.76
SCN9A-205ENST00000454569 IGHV3-20A0A0C4DH32 117 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 PDE5AO76074 875 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 PORP16435 677 aaPredicted RBP10.27□□□□□ -0.76
SCN9A-205ENST00000454569 F8A1P23610 371 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 MC3RP41968 323 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 TRPC1P48995 793 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 SLC7A2P52569 658 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 HSD17B7P56937 341 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 RPS18P62269 152 aaKnown RBP10.27□□□□□ -0.76
SCN9A-205ENST00000454569 SKP1P63208 163 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 KCNC4Q03721 635 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 EIF3IQ13347 325 aaKnown RBP10.27□□□□□ -0.76
SCN9A-205ENST00000454569 PRICKLE4Q2TBC4 344 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 DNAL1Q4LDG9 190 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 COX20Q5RI15 118 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 CPZQ66K79 652 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 TMEM107Q6UX40 140 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 GPR155Q7Z3F1 870 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 PGAM4Q8N0Y7 254 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 ZNF321PQ8N8H1 164 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 PCYOX1LQ8NBM8 494 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 ROPN1LQ96C74 230 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 SLC46A1Q96NT5 459 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 OR1F2PQ96R84 312 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 CPPED1Q9BRF8 314 aaPredicted RBP10.27□□□□□ -0.76
SCN9A-205ENST00000454569 THTPAQ9BU02 230 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 TGIF2Q9GZN2 237 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 SERHL2Q9H4I8 314 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 RMND5AQ9H871 391 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 POLR1BQ9H9Y6 1135 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 ACSS1Q9NUB1 689 aaPredicted RBP10.27□□□□□ -0.76
SCN9A-205ENST00000454569 TMEM181Q9P2C4 612 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 PSME2Q9UL46 239 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 SNX8Q9Y5X2 465 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 ZNF780BQ9Y6R6 833 aa10.27□□□□□ -0.76
SCN9A-205ENST00000454569 PRORSD1PA6NEY8 169 aa10.26□□□□□ -0.77
SCN9A-205ENST00000454569 ERN1O75460 977 aaKnown RBP10.26□□□□□ -0.77
SCN9A-205ENST00000454569 KLF7O75840 302 aaPredicted RBP10.26□□□□□ -0.77
SCN9A-205ENST00000454569 ANP32DO95626 131 aa10.26□□□□□ -0.77
SCN9A-205ENST00000454569 UMODP07911 640 aa10.26□□□□□ -0.77
SCN9A-205ENST00000454569 S1PR1P21453 382 aa10.26□□□□□ -0.77
SCN9A-205ENST00000454569 GZMMP51124 257 aa10.26□□□□□ -0.77
SCN9A-205ENST00000454569 RPS26P62854 115 aaKnown RBP10.26□□□□□ -0.77
SCN9A-205ENST00000454569 STX4Q12846 297 aa10.26□□□□□ -0.77
SCN9A-205ENST00000454569 EXOSC7Q15024 291 aaKnown RBP10.26□□□□□ -0.77
SCN9A-205ENST00000454569 MLC1Q15049 377 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms