RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 LINC01560Q8TB33 94 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 SPPL2AQ8TCT8 520 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 SREK1Q8WXA9 508 aaKnown RBP13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 RIT1Q92963 219 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 RGMAQ96B86 450 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 CFAP36Q96G28 342 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 WDYHV1Q96HA8 205 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 MS4A14Q96JA4 679 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 RILPQ96NA2 401 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 TRIB1Q96RU8 372 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 WDR83Q9BRX9 315 aaKnown RBP13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 RBM24Q9BX46 236 aaKnown RBP13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 LYARQ9NX58 379 aaKnown RBP13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 PTBP2Q9UKA9 531 aaKnown RBP13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 CAMK2AQ9UQM7 478 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 CHMP2BQ9UQN3 213 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 JMJD1CQ15652 2540 aa13.07□□□□□ -0.32
LYSMD3-202ENST00000453259 MYOCOSA0A1B0GUC4 107 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 C2orf92A0A1B0GVN3 265 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 SH3D21A4FU49 640 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 SMPD2O60906 423 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 WISP3O95389 354 aaPredicted RBP13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 S100BP04271 92 aaPredicted RBP13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 RHOXF2BP0C7M4 288 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 CYP4B1P13584 511 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 NAGAP17050 411 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 BMP7P18075 431 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 FPR1P21462 350 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 CHMP24386 653 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 HSPA7P48741 367 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 DIO3P55073 304 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 HERVK_113P63132 956 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 ERVK-8P63133 956 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 SLAMF1Q13291 335 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 ZNF460Q14592 562 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 C18orf21Q32NC0 220 aaPredicted RBP13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 DEPDC1Q5TB30 811 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 HLA-DQA1Q5Y7H0 255 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 Q71RC1 249 aaPredicted RBP13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 ZNF592Q92610 1267 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 UCN3Q969E3 161 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 ABTB1Q969K4 478 aaPredicted RBP13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 MCMBPQ9BTE3 642 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 ERVK-6Q9BXR3 956 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 UGT2B28Q9BY64 529 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 EPB41L4BQ9H329 900 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 WDR41Q9HAD4 459 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 TRMT1Q9NXH9 659 aaKnown RBP13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 MOCS1Q9NZB8 636 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 ERVK-19Q9WJR5 959 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 NPFFR2Q9Y5X5 522 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 PSAT1Q9Y617 370 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 MPDZO75970 2070 aa13.06□□□□□ -0.32
LYSMD3-202ENST00000453259 NCKAP5O14513 1909 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 RTCAO00442 366 aaKnown RBP13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 RCBTB2O95199 551 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 LY6G6DO95868 133 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 SLC35E2BP0CK96 405 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 SLC35E2P0CK97 266 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 CPA2P48052 419 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 RAP1GDS1P52306 607 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 ARL4CP56559 192 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 PHEXP78562 749 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 CBLBQ13191 982 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 SNTA1Q13424 505 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 ZNF267Q14586 743 aaPredicted RBP13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 FNDC7Q5VTL7 733 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 TIGD3Q6B0B8 471 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 ENPP6Q6UWR7 440 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 ADGRE4PQ86SQ3 457 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 OR4N5Q8IXE1 308 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 OR7G3Q8NG95 312 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 WNT2BQ93097 391 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 PPWD1Q96BP3 646 aaKnown RBP13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 CD244Q9BZW8 370 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 GALNT8Q9NY28 637 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 CD274Q9NZQ7 290 aa13.05□□□□□ -0.32
LYSMD3-202ENST00000453259 HRKO00198 91 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 CRHP06850 196 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 NR2F6P10588 404 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 EPORP19235 508 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 IVDP26440 423 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 CASP3P42574 277 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 WNT3P56703 355 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 PPP2R2BQ00005 443 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 SETDB1Q15047 1291 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 GRHL2Q6ISB3 625 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 C20orf204Q6ZNR8 217 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 DGAT2L6Q6ZPD8 337 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 PRIMA1Q86XR5 153 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 UBTD2Q8WUN7 234 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 REPS1Q96D71 796 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 GNRHR2Q96P88 292 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 PRM3Q9NNZ6 103 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 TEX10Q9NXF1 929 aaPredicted RBP13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 PSD3Q9NYI0 1048 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 ZNF226Q9NYT6 803 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 PACSIN3Q9UKS6 424 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 TESMINQ9Y4I5 508 aa13.04□□□□□ -0.32
LYSMD3-202ENST00000453259 HIVEP2P31629 2446 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms