RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 FGF9P31371 208 aaPredicted RBP16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 CLCNKAP51800 687 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 MBTPS1Q14703 1052 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 ZNF630Q2M218 657 aaPredicted RBP16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 SYT14P1Q58G82 188 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 LIPJQ5W064 366 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 FUT10Q6P4F1 479 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 TRIM40Q6P9F5 258 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 ASB18Q6ZVZ8 466 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 VRK3Q8IV63 474 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 OXR1Q8N573 874 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 RC3H2Q9HBD1 1191 aaKnown RBP16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 SLCO1C1Q9NYB5 712 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 NINQ8N4C6 2090 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 PAHP00439 452 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 C8GP07360 202 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 ICAM2P13598 275 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 STOMP27105 288 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 CTGFP29279 349 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 GABRA5P31644 462 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 ATP12AP54707 1039 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 ADAM15Q13444 863 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 SLC5A12Q1EHB4 618 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 PLA1AQ53H76 456 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 KIAA1324Q6UXG2 1013 aaKnown RBP16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 USP45Q70EL2 814 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 LRR1Q96L50 414 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 SYT17Q9BSW7 474 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 WRAP53Q9BUR4 548 aaKnown RBP16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 MRPL9Q9BYD2 267 aaKnown RBP16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 SCML1Q9UN30 329 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 CCDC88CQ9P219 2028 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 SOD1P00441 154 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 HOXD4P09016 255 aaPredicted RBP16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 ELAVL4P26378 380 aaKnown RBP16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 CHI3L1P36222 383 aaPredicted RBP16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 NNMTP40261 264 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 OPRD1P41143 372 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 NSG1P42857 185 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 CCT3P49368 545 aaKnown RBP16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 CCL23P55773 120 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 DOC2AQ14183 400 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 CDKN3Q16667 212 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 SPDYE7PQ495Y7 208 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 DCST1Q5T197 706 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 FAM26EQ8N5C1 309 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 GOT1L1Q8NHS2 421 aaPredicted RBP16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 TMEM161AQ9NX61 479 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 ZSCAN32Q9NX65 697 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 KLHL42Q9P2K6 505 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 ANGPT4Q9Y264 503 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 OR51B4Q9Y5P0 310 aa16.29■□□□□ 0.2
SCUBE2-202ENST00000450649 HTTP42858 3142 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 E7EQ34 232 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 IFNA7P01567 189 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 RRASP10301 218 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 ANXA3P12429 323 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 SSTR2P30874 369 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 CSTF1Q05048 431 aaKnown RBP16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 C3orf38Q5JPI3 329 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 GPAT4Q86UL3 456 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 WBP2Q969T9 261 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 CIDECQ96AQ7 238 aaPredicted RBP16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 ZNF582Q96NG8 517 aaPredicted RBP16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 PRR14Q9BWN1 585 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 GHITMQ9H3K2 345 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 TRAV6A0A075B6T7 132 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 SHISA3A0PJX4 238 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 LANCL1O43813 399 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 SERPINI2O75830 405 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 MPC2O95563 127 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 DHFRP00374 187 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 IRF1P10914 325 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 GARNL3Q5VVW2 1013 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 MZT2AQ6P582 158 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 ADGRF3Q8IZF5 1079 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 TM6SF2Q9BZW4 377 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 BHLHE41Q9C0J9 482 aaPredicted RBP16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 PPA2Q9H2U2 334 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 CLEC4MQ9H2X3 399 aaPredicted RBP16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 CUEDC1Q9NWM3 386 aaPredicted RBP16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 UBQLN2Q9UHD9 624 aa16.28■□□□□ 0.2
SCUBE2-202ENST00000450649 SEMA7AO75326 666 aa16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 ARAFP10398 606 aa16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 CXCL3P19876 107 aa16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 SPAM1P38567 509 aa16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 ZNF81P51508 661 aa16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 EPHA5P54756 1037 aa16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 SRP54P61011 504 aaKnown RBP16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 ZNF33BQ06732 778 aa16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 DBPQ10586 325 aaPredicted RBP16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 LGALSLQ3ZCW2 172 aaPredicted RBP16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 PGBD2Q6P3X8 592 aa16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 CD200R1LQ6Q8B3 271 aa16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 ADGRD2Q7Z7M1 963 aa16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 CBARPQ8N350 705 aaPredicted RBP16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 SCMH1Q96GD3 660 aa16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 METTL2AQ96IZ6 378 aaKnown RBP16.27■□□□□ 0.2
SCUBE2-202ENST00000450649 TRDV1A0A1B0GX56 115 aa16.27■□□□□ 0.19
SCUBE2-202ENST00000450649 C7orf66A4D0T2 115 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms