RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 RFXAPO00287 272 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 PEX11BO96011 259 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 LHCGRP22888 699 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 PDHA2P29803 388 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 ARF5P84085 180 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 TIAL1Q01085 375 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBE3B-204ENST00000449510 ZNF311Q5JNZ3 666 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 KANSL1Q7Z3B3 1105 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 TMED4Q7Z7H5 227 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 FAM129CQ86XR2 697 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBE3B-204ENST00000449510 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBE3B-204ENST00000449510 GRHL3Q8TE85 626 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 OTUB2Q96DC9 234 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 SLC39A13Q96H72 371 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 EPYCQ99645 322 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 NTMT1Q9BV86 223 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 ARL6Q9H0F7 186 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 ZNF226Q9NYT6 803 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 ZNF639Q9UID6 485 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 CEP290O15078 2479 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 FER1L6Q2WGJ9 1857 aa11.8□□□□□ -0.52
UBE3B-204ENST00000449510 OR6C74A6NCV1 312 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 ATP6V1G2-DDX39BF2Z307 99 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 PROM1O43490 865 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 CACNG3O60359 315 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 HLA-DQA2P01906 255 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 MT-ND4P03905 459 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 ALDOBP05062 364 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 GYPBP06028 91 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 BMP1P13497 986 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 AOAHP28039 575 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 RPL3P39023 403 aaKnown RBP11.79□□□□□ -0.52
UBE3B-204ENST00000449510 CTSOP43234 321 aaPredicted RBP11.79□□□□□ -0.52
UBE3B-204ENST00000449510 AP1S2P56377 157 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 SPIN4Q56A73 249 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 ALG1LQ6GMV1 187 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 SIGIRRQ6IA17 410 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 NCEH1Q6PIU2 408 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 ZNF767PQ75MW2 155 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 SYT9Q86SS6 491 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 CCDC71Q8IV32 467 aaPredicted RBP11.79□□□□□ -0.52
UBE3B-204ENST00000449510 NKD1Q969G9 470 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 ELMOD3Q96FG2 381 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 THAP7Q9BT49 309 aaPredicted RBP11.79□□□□□ -0.52
UBE3B-204ENST00000449510 UBQLN2Q9UHD9 624 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 IKZF2Q9UKS7 526 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 FBXL3Q9UKT7 428 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 KLK4Q9Y5K2 254 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 FAM186AA6NE01 2351 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 A0A1B0GW55 424 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 H3BUI4 141 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 ADAM12O43184 909 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 CSF3P09919 207 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 DUX4L2P0CJ85 424 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 DUX4L3P0CJ86 424 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 DUX4L4P0CJ87 422 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 DUX4L5P0CJ88 424 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 DUX4L6P0CJ89 424 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 DUX4L7P0CJ90 424 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 LAMP2P13473 410 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 CD6P30203 668 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 GRPRP30550 384 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 AHRP35869 848 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 WNT4P56705 351 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 EIF4HQ15056 248 aaKnown RBP11.79□□□□□ -0.52
UBE3B-204ENST00000449510 SYPL1Q16563 259 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 PRPF38BQ5VTL8 546 aaKnown RBP11.79□□□□□ -0.52
UBE3B-204ENST00000449510 SAXO2Q658L1 398 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 ELP2Q6IA86 826 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 PLBD1Q6P4A8 553 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 ALKAL2Q6UX46 152 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 OR8S1Q8NH09 359 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 SCLYQ96I15 445 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 ST6GAL2Q96JF0 529 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 SPATA5L1Q9BVQ7 753 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 RSPH9Q9H1X1 276 aaPredicted RBP11.79□□□□□ -0.52
UBE3B-204ENST00000449510 DIABLOQ9NR28 239 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 DUX4Q9UBX2 424 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 MGAT4BQ9UQ53 548 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 SHANK3Q9BYB0 1731 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 ARPC5O15511 151 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 RFPL3O75679 317 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 PRKAR2AP13861 404 aaKnown RBP11.79□□□□□ -0.52
UBE3B-204ENST00000449510 UGT2B10P36537 528 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 NAA10P41227 235 aaPredicted RBP11.79□□□□□ -0.52
UBE3B-204ENST00000449510 MLLT3P42568 568 aaPredicted RBP11.79□□□□□ -0.52
UBE3B-204ENST00000449510 MAPK8P45983 427 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 CCR6P51684 374 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 TGM3Q08188 693 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 GALEQ14376 348 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 GRIN2CQ14957 1233 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 CRTC1Q6UUV9 634 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 CFAP77Q6ZQR2 320 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 SYNPOQ8N3V7 929 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 MED30Q96HR3 178 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 SLC28A3Q9HAS3 691 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 MARK1Q9P0L2 795 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 FNIP2Q9P278 1114 aa11.79□□□□□ -0.52
UBE3B-204ENST00000449510 NUP50Q9UKX7 468 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms